Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0024 ATGGACGCGAATCAGACACTCTTCTCTTCAGTGACGTTATTGCACGAAGTGCCATCGTTGGGATTTGAAGTCTACAATGTGTGCGTGAATCATCCAATGAAGATAATATCCGATGGCATATGGACACAACATGGAAGTGCATTACCTACACAGTATTCATACACCATGCTTGAGCTTCAAATACTTATCATCTTCGTGGTCACGCAAGGCTTTCATTTCATTCTCAACCGATTAGGCGTCCCTTTTTTCGTTTCACAAGTCATGACAGGGTTTCTGATGGGGCCATCAGTTCCGACAGGACCATTGGAAAAGTACAAGAAGATGCTGTTCCCGTTCGGGAGTCCTGACATCCTAAGCACACTATCATCGTTGGGGTACTCCTTCTACCTGTTCCTGAACTCAGTGCAGATGGACCTAAGCTTGATCACGAAAACAGGGAGAAAGGCTTGGGTGATAGGGCTTTGCTGCTATGGCATTCCCATAGTGGTGGGGTGTGGGAGCATGGGGTTGTCGAATTCCACGTGGAAGAGGATCCTGGGAGAGGACATTTCTGCTTTGCCTGTGGTCTTCATATCTCACAGTAGTTGCTCCTTCGCTGTCATTTCATGGTTGCTCAATGACCTCGGAATCCTCAACTCCGAACTCGGTCGCCTCGCACTCTCAGCAGCTTTTGTTAACGATGTTGCAGGTGGACTCTGGGCAGGGATTGGTGCTGCATATTTCGGGAGACAGAACATGAGCATGTCTATCCGTATTAGAAACGTTACGGCATTTCTTGCTTACGCAATCTTCATTCTTCTCATTGGTCGTCCTGCGATGAGGTGGATCGTGAAGAGGACCCCAGAAGGTAGATCGGTTAACAAGGGATACATCTACGCCATCATAGTAGTGTTCTTGGGATTGGGCTACTTTGCCAAGTTTTTCGGTGAACCCTTCTTAGTAGGAGCTGTTATTTTTGGACTTGCAGTCCCTGAGGGTCCTCCTCTGGGTTCTGCACTCGTTACCCAACTTGAGTTGTTCTCCAAGTGGTTCCTCTGCTCTATTTTTGTCACATGTGTCACCATGAAGGTGGATCTCACCAAATGTAACTCTCTCTCTTTCGTAATTGTCATTTCTGGTGTCATCATTATGGTGCACCTGGTTAGGTGGCTTTTGTGCATGGGAATTTGCCGATACTGCAAGATTCCTTTCAAGGATGGCTTTTGTCTTGCTCTCATTTTGAGCTGCAAAGGGGTTGTTGATATCTGCTCCTATCTCCTAGTCTACGATGCCATGGTACAAAAGAGAACAGTAGTAGATGTTATGATCGTCTCAGTGTTGGTCCTAGGTACGGCTTCGAGGTTTGGTGTCAAGGCATTGTATGACCCTTCAAGGAAATACGCAGGGTACCAGCATAGGAACATCATGAGCTTGAAACACAGTGAGCTTCGGATAGTTGCATGCATCCACAAGCCATGGCACTCGGTTCACATCAAGAACGTGCTCGAATTTTGCTCCCCGGCACCAGATAACACACTGGTAGCAGAAATTTTGCACCTCATGGAGCTAGTTGGAAGGTCCAATCCCATTTTCATTGCACACAAACTTCAGCAAAGTGCAGCATCATCATCCTACAACTACTCTGGGGAACTCATTGTAGCCTTTGACCTTTTCGAACGTGACTATCTTGGTGCTGTCACTGCCAACACCTACACTGCCATATCCCCAGTGATGTTCATGAATGAAGATGTGTGCAACCTTGCTTTGGACAAAAATGCAGCCCTTATAGTCCTTCCATTCCATGTGAAATGGGGAGGGGATGGTTCAGTTGAGTCAGAGGATAGCAACATAAGGGCGCTTAATTCCAGGATTTTAGAAAGGGCACCTTGCTCTGTTGGGATTCTTGTGAACCGTGGCCCTAGCTTCAACTCAAGAAGAATCAGAGCGGCCATGGTTTTCTTGGGAGGACCTGATGATAGAGAGGCGTTGTGCTTGGCTAAGAGGTTTGTGAAAGATGTTGATAATAGTTTGGTTGTGTTCAGGTTGTTGGCACACGACAAAGATACCTCCAATTGGGATCACATGATTGATGATGAAGCGATGAGGGAAATAAGTGGAGTTCATGTTAATCTAGAAAATGTTAGATATGAAGAAATTACTATAGGAGATGCATCCCAGACAACGTTTCTCATCAAAGATATAGCCAACAAATTTGATTTTATTGTAGTTGGGAGACGCTATGGGATCAGATCTTCTCAGACCTATGGCTTGGAGCATTGGACTGAATATTCAGAGTTAGGGGTAATTGGTGATTTGCTTGCTTCACATGATACAGATACTACGGCTTCAGTTTTGGTTGTGCAACAACAACCATCTCATGAAGACCACAGATAA 2373 0.4564 MDANQTLFSSVTLLHEVPSLGFEVYNVCVNHPMKIISDGIWTQHGSALPTQYSYTMLELQILIIFVVTQGFHFILNRLGVPFFVSQVMTGFLMGPSVPTGPLEKYKKMLFPFGSPDILSTLSSLGYSFYLFLNSVQMDLSLITKTGRKAWVIGLCCYGIPIVVGCGSMGLSNSTWKRILGEDISALPVVFISHSSCSFAVISWLLNDLGILNSELGRLALSAAFVNDVAGGLWAGIGAAYFGRQNMSMSIRIRNVTAFLAYAIFILLIGRPAMRWIVKRTPEGRSVNKGYIYAIIVVFLGLGYFAKFFGEPFLVGAVIFGLAVPEGPPLGSALVTQLELFSKWFLCSIFVTCVTMKVDLTKCNSLSFVIVISGVIIMVHLVRWLLCMGICRYCKIPFKDGFCLALILSCKGVVDICSYLLVYDAMVQKRTVVDVMIVSVLVLGTASRFGVKALYDPSRKYAGYQHRNIMSLKHSELRIVACIHKPWHSVHIKNVLEFCSPAPDNTLVAEILHLMELVGRSNPIFIAHKLQQSAASSSYNYSGELIVAFDLFERDYLGAVTANTYTAISPVMFMNEDVCNLALDKNAALIVLPFHVKWGGDGSVESEDSNIRALNSRILERAPCSVGILVNRGPSFNSRRIRAAMVFLGGPDDREALCLAKRFVKDVDNSLVVFRLLAHDKDTSNWDHMIDDEAMREISGVHVNLENVRYEEITIGDASQTTFLIKDIANKFDFIVVGRRYGIRSSQTYGLEHWTEYSELGVIGDLLASHDTDTTASVLVVQQQPSHEDHR* 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0024 790 PANTHER CATION/H + ANTIPORTER 19 785 - -
Vra10g0024 790 PANTHER CATION/H+ EXCHANGER 2 19 785 - -
Vra10g0024 790 Pfam Sodium/hydrogen exchanger family 62 441 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Vra10g0024 790 Gene3D - 55 461 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0024 Vra-Chr10 1288027 1292649 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0024 27 780 Antiporter Super Family AT3G44900 36.139 4.24e-144 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0024 - - var:108341345 1498.41