Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi99g00070 ATGGCTCGTCCGATGGAAAAAATTGTTGACATCAACGACACCAAAGAGTTGTGGAAAGTGGCTGTGAGAGTTGCGCATAAGTGGAAGGTGGTCTCCAATAACAAGGAGCACTTCGAGATGATCTTCCAAGATAAAGAGGGCTGTGATATACACGTTGTTGTTCCCACTGCATGCATGGCCGCGTACAATGAGAAGTTTGAGGTGGACCGCACCTATACTGTGTCAAATTTTGCGGTGCAGCCTAATAACTTAATTTTCAAACCAAGTTCTCATAACTTCTTGGTGAAATTTACTGGAGGAACTGCTGTTGGTGATGTTGACAAACATGACATACCTCTCAAACCACGCCCGTTGACCAGTTTCCCTGACATCATTAACGGGAACTTTCAGAAGAATCTACTCATTGTATCTTTGATTGTTACTTATCGAATAGTTTTAAACAATCCATCAGATGTTATTGGTATGCTCGAAAGTGTTGGGTATCAACAGACGCAAAGTGGCGGAAAAAAATGTCAGGCAAATTTTCTACTGAGGGATGCAAGCAACAACACCGTTAACTGCACTCTCTGGGAGGACTATGCGAAACAGTTTTTTAAGTTTACCGAAGACAAAGCTGTGACAAGTGGGCCTATTGTTGTTTTCATTCAGTATGCGAAAGTTAAAGAAGCTGGCCATTACCCTCTCTCCGTTACCAACACATTCCATGTTACCAAGCTCCGTATCAATTCAGATCTGCCGATTGTAAAGGACTTCCTTAACAGTTTCCCAAAGGAATCGTTGCGTGCTGTTTCCACGCAACTAACCTCTCAATCTCAACAGTACTCCCGCACCTCGACAACGGATAACGTTAGGCAGTCTCATATGCAAAAGTTGCTGAAAGGTGCGATTTCAGTACCAATTAGTGAGATGAAGAAAATCCGCGAGAGTAAATTATGTGCTACTGTTGCGAAAACAAATAAACTCATTGCGTCTTCCCACGGATGGTACTATCAGTGCTGCCATGAGTGCACTAAATCAGTTCGCGGTGACAAACCTCCATACAAGTGTGATAATGGACATTCTACTGAGGTGGAGATCTATAAGTATAAGATTGAAGTCGAAGGTTACTATTTGCAAACTTCATGCAAATTCATTTTCTGGGATAGAGAATGTACCGATATATTACACGTCTCTGCTGCTCATATGCGGGATACAATGATAAAGGCTGGTATCACAGATCCATTAGAATTTCCATTAGATCTTGATGCTATGTTGGACTTGGATCTTGCATTGAGGGTTAAATGGCAGCCCAGCTGGGACAGCGCCTCAGTTATAATGTTCATTAAGGATGATGAGTTTGTAAAACAATTGAAGGCTCCTTGGGCGGATACTCAGGTCGTGAATTCTGAACCATCGGTGACACCACTCCCGTTACAGATTAAAGAGAGTGTCGATGAAGCCAAAACTGATGCTGCCGATGATTGTGACGTTCCGACGGACTTAGAGATAACATCGAAACACAACCCGGAGCCTCTTACTCCCACTGCAAAAAGGCAGAGTCATGGTGGTACCAGCGAGTCGACGTCTGTATTTGACGGTGAACTATCTTCGACCAAATTGAAGAAGATCATTAAGTTGGAGAAGACCAAGTAG 1632 0.4308 MARPMEKIVDINDTKELWKVAVRVAHKWKVVSNNKEHFEMIFQDKEGCDIHVVVPTACMAAYNEKFEVDRTYTVSNFAVQPNNLIFKPSSHNFLVKFTGGTAVGDVDKHDIPLKPRPLTSFPDIINGNFQKNLLIVSLIVTYRIVLNNPSDVIGMLESVGYQQTQSGGKKCQANFLLRDASNNTVNCTLWEDYAKQFFKFTEDKAVTSGPIVVFIQYAKVKEAGHYPLSVTNTFHVTKLRINSDLPIVKDFLNSFPKESLRAVSTQLTSQSQQYSRTSTTDNVRQSHMQKLLKGAISVPISEMKKIRESKLCATVAKTNKLIASSHGWYYQCCHECTKSVRGDKPPYKCDNGHSTEVEIYKYKIEVEGYYLQTSCKFIFWDRECTDILHVSAAHMRDTMIKAGITDPLEFPLDLDAMLDLDLALRVKWQPSWDSASVIMFIKDDEFVKQLKAPWADTQVVNSEPSVTPLPLQIKESVDEAKTDAADDCDVPTDLEITSKHNPEPLTPTAKRQSHGGTSESTSVFDGELSSTKLKKIIKLEKTK 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi99g00070 543 PANTHER OS03G0429900 PROTEIN 10 431 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Vivi99g00070 543 MobiDBLite consensus disorder prediction 499 526 - -
Vivi99g00070 543 Gene3D - 110 263 IPR012340 -
Vivi99g00070 543 MobiDBLite consensus disorder prediction 478 496 - -
Vivi99g00070 543 SUPERFAMILY Nucleic acid-binding proteins 6 103 IPR012340 -
Vivi99g00070 543 MobiDBLite consensus disorder prediction 478 526 - -
Vivi99g00070 543 Gene3D - 3 104 IPR012340 -
Vivi99g00070 543 CDD RPA1_DBD_A_like 19 103 - -
Vivi99g00070 543 CDD RPA1_DBD_B_like 151 256 - -
Vivi99g00070 543 Gene3D - 264 443 IPR012340 -
Vivi99g00070 543 SUPERFAMILY Nucleic acid-binding proteins 147 258 IPR012340 -
Vivi99g00070 543 Pfam Domain of unknown function DUF223 39 134 IPR003871 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi99g00070 1 288 Core DNA Replication Machinery Family AT5G08020 22.442 1.17e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi99g00070 - - vvo:131605367 695.656