Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi99g00065 ATGGAAGGAAGTTCAGTCAATCGACCCAACCAAACTGTATCAAGAGATAATGAGGCTGGCGTTGAAATCCAAAAGAGTTCCAAACGCACGCGGAGTTTTGTTCTCAAACAAATGTTGGAAGAGCTACGTGTTGTGAAAAAGGAAAGTATGGATGCGATAGAAGATATCGAGGCCTATCAGGTGAAAAAAGAACCAGTGGTCGAGGAAGAACAACAGTTTGGATTGGCAGGAAATGTTTTGGACCGTGAAGAGATTCCAGGAGGGGGTAAGAAAAGCAAAGGGAAGCAACAGCCGGCAGTAACTTCTGGCGTGCATGGAAGTAAAACCTATCATGCAGCTGTGTACCGTGCATCATTTCAACGAAGAGACAAAAGTAATGCTGGGTCAGACAACCAAAATGGGAAGGATGTAGCCGTTGCAATGAGCAACGATGAGGGAAGAATCCGGCGTGAAGGCAAAAGGAAAGGCTGTCAACCTGGAATGGCTGTCACTGGCGAACGCCGAACCCGGCAAAAAAAGGACCTTGTAGCAACCAAAGATGCCAGGAATGGAGGTGCTGAAACCTGTTTGGAGAAGGTGAAAGGGAAGGCAAAACTTGTTGGAAACAGTGTGGAAAAGGCGTCCATGAGGCAGAATCAGAAAGCCAAAGACAAAGTTTCAGGCAGGAGTGTCAATCGTGCAAATTTTGGAAGTAGGAAATCCACTCTCTCTTCTATGGTTGTCAAAGAGCAGTTCTGGACCAGGGTTGTTGACAATCCAGTTAAGCTGGCAAACAACGTTCTGCATATTCCAAGATCAGTTGTTCGTGAATGTATCTCTGGCAAGATTCCGAGAATAACCTTGATTGATCGGAACAATGCTGTTCCCTACTACTGCGAGATGATCAAGAGGGAAGATACTGGGGACAGGTATTTATTGGGTGGATGGTCGGACTTCTGTAAAGACAACAAACTTCAGAAGGGAGACACGTTGCGGTTCTGCATTAGATATCCTCCAGTGGATTCGATCTCGGTGACCATAGAGCGTGGAAAAGCAGAGTGA 1041 0.4611 MEGSSVNRPNQTVSRDNEAGVEIQKSSKRTRSFVLKQMLEELRVVKKESMDAIEDIEAYQVKKEPVVEEEQQFGLAGNVLDREEIPGGGKKSKGKQQPAVTSGVHGSKTYHAAVYRASFQRRDKSNAGSDNQNGKDVAVAMSNDEGRIRREGKRKGCQPGMAVTGERRTRQKKDLVATKDARNGGAETCLEKVKGKAKLVGNSVEKASMRQNQKAKDKVSGRSVNRANFGSRKSTLSSMVVKEQFWTRVVDNPVKLANNVLHIPRSVVRECISGKIPRITLIDRNNAVPYYCEMIKREDTGDRYLLGGWSDFCKDNKLQKGDTLRFCIRYPPVDSISVTIERGKAE 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi99g00065 346 SUPERFAMILY DNA-binding pseudobarrel domain 258 327 IPR015300 -
Vivi99g00065 346 MobiDBLite consensus disorder prediction 204 223 - -
Vivi99g00065 346 Gene3D - 209 342 IPR015300 -
Vivi99g00065 346 ProSiteProfiles B3 DNA-binding domain profile. 246 344 IPR003340 GO:0003677
Vivi99g00065 346 MobiDBLite consensus disorder prediction 71 106 - -
Vivi99g00065 346 MobiDBLite consensus disorder prediction 1 27 - -
Vivi99g00065 346 SMART B3_2 247 344 IPR003340 GO:0003677
Vivi99g00065 346 CDD B3_DNA 261 326 IPR003340 GO:0003677
Vivi99g00065 346 MobiDBLite consensus disorder prediction 150 173 - -
Vivi99g00065 346 Pfam B3 DNA binding domain 256 326 IPR003340 GO:0003677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Vivi99g00065 B3 1.3e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi99g00065 - K22909 vvo:131617283 334.339