Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi99g00053 ATGAATAATTCTGGAAAAGAAAAAGCATTGAATCTTGACACTAAGGACAAGCTTTATGTCCAATCTAATGCCTCCAAAGCTCCACCATCTCCCAAACAACCTTTCTTCATTGGTGTTGCTGGTGGAACTGCATCTGGGAAAACAACTGTATGCAACTTGATAAACAGCCAGCTTCATGATCAACGTATTGTCCTCATTAATCAAGACTCATTTTACCACTCATTGAGTGATGATATACTACAAAAAGTTAATGACTATAACTTTGATCATCCTGATGCATTTGATATAGAGCTTATGCTTTCTAGTATGGAGAAATTAAAACATGGGCAACCGGCTTCCATACCGAATTATAATATGAGTACTCGTAAGAGAATTGAACCTCCACGCCAGGTTCATCCTGCAGACATCGTAGTTTTAGAAGGAATACTAGTTCTTCACGATTCCCGTGTTCGCGATCTTTTGAACATGAAGATCTTTGTTGACGAAGATTCTGATATTCGCCTCACACGAAGGATTCAACGCCTCACAATTGAACATGGGAGAAACATTCAAAATGTTCTAGACCAATATTGCAGATTTGTAAAACCTAGTTTTGAAGATTTTGTACTTCCAACAAAAAAATATGCTGATATTATCATACCTGGTGGAGGAGATAATGATGTTGCTATTGATTTGATAATTCAAAATATTCGGACAAAGCTTGGTCAACATGATTTGTGTAAAATATATCCAAATATTTTTGTCATTTTTTCTACTTTTCAGATAAAAGGAATGCATACTCTAATTCGTGATGTTGGAACTACAAAACATGATTTTGTATTTTATTCGGATCGTCTTATTAGATTGGTTGTTGAACATGGACTTGGTCATCTTCCTTTTACAGAAAAACAAGTCACAACACCAACAGGATCTGTATATTCTGGTGTGATTTTTTGTAGCAGATTATGCGGAGTATCAGTTATTAGAAGTGGAGAAAGCATGGAAAATGCATTGAGAGCATGTTGTAAAGGAATCAAAATTGGTAAAATACTTATTCTTGGACATGGCACAGATGGAAGACAGTTAATCTATGAGAAGCTACCATCAGATATTGCAAGTCGTCATGTGTTGCTACTTGATCCAGTTCTAGCTACAGGAAGTTCTGCAGTGAAAGCTATCTCTCTACTTCTGAAGAAAGGTGTATTAGAATCAAACATCATCTTTCTAAATTTAATAGCAGCACCACAAGGAATAAATGCAGTTTGTGAGAGATTTCCAATGATGAAACTTGTAACATCGGAGATTGATGCAACGCTAAATGAGAGTTCTCGTGTGATCCCTGGATTGGGCGAGTTTGGTGATCGTTACTTTGCCACGGATGATTAG 1365 0.3656 MNNSGKEKALNLDTKDKLYVQSNASKAPPSPKQPFFIGVAGGTASGKTTVCNLINSQLHDQRIVLINQDSFYHSLSDDILQKVNDYNFDHPDAFDIELMLSSMEKLKHGQPASIPNYNMSTRKRIEPPRQVHPADIVVLEGILVLHDSRVRDLLNMKIFVDEDSDIRLTRRIQRLTIEHGRNIQNVLDQYCRFVKPSFEDFVLPTKKYADIIIPGGGDNDVAIDLIIQNIRTKLGQHDLCKIYPNIFVIFSTFQIKGMHTLIRDVGTTKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVTTPTGSVYSGVIFCSRLCGVSVIRSGESMENALRACCKGIKIGKILILGHGTDGRQLIYEKLPSDIASRHVLLLDPVLATGSSAVKAISLLLKKGVLESNIIFLNLIAAPQGINAVCERFPMMKLVTSEIDATLNESSRVIPGLGEFGDRYFATDD 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi99g00053 454 SUPERFAMILY PRTase-like 236 452 IPR029057 -
Vivi99g00053 454 NCBIfam uridine kinase 35 233 IPR000764 -
Vivi99g00053 454 Pfam Uracil phosphoribosyltransferase 251 452 - -
Vivi99g00053 454 Gene3D - 30 236 IPR027417 -
Vivi99g00053 454 FunFam Uridine kinase 30 236 - -
Vivi99g00053 454 CDD PRTases_typeI 315 425 IPR000836 -
Vivi99g00053 454 CDD UMPK 36 233 IPR000764 -
Vivi99g00053 454 Gene3D - 237 452 IPR029057 -
Vivi99g00053 454 FunFam Uridine kinase 237 452 - -
Vivi99g00053 454 PRINTS Uridine kinase signature 64 75 - -
Vivi99g00053 454 PRINTS Uridine kinase signature 179 190 - -
Vivi99g00053 454 PRINTS Uridine kinase signature 165 175 - -
Vivi99g00053 454 PRINTS Uridine kinase signature 34 51 - -
Vivi99g00053 454 PRINTS Uridine kinase signature 201 214 - -
Vivi99g00053 454 PRINTS Uridine kinase signature 109 124 - -
Vivi99g00053 454 PANTHER URIDINE KINASE 20 363 - -
Vivi99g00053 454 Pfam Phosphoribulokinase / Uridine kinase family 36 222 IPR006083 GO:0005524|GO:0016301
Vivi99g00053 454 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 226 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi99g00053 33 454 PRT Gene Family AT1G55810 72.813 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi99g00053 K00876 - qsa:O6P43_008877 697.582