Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi999g00006 ATGTCACTCAAGATGTTGGTTCTTACTCCGATGAAAATAAAGAATCCTGGAAAACATTTTGTCTTCCACGACCTTTCATCAATCAAGGATTTCTATGCTAAATACGCTCATGTAAAGGGATTTTCTTTGAGAAGAAATCTGCACTCCTTCTATGATTCTCGTAACAAAAAAACTGACATTGTGCAATATGTCCGTTATGTTTGTAAAAAGCATTGTTTCAAGCATGGGAGTCGGGCGGATCCTAAGAACAAGACAAACTCGGATACTCCTGTTCTCATTGAATTTCAAAAAGATAAAGAACTTCCCGAGGAAAGGACTGGTTGCCCAGCTAGTATTTTGTTGAAGTATGATTCCAATAGTAAAGGTTATCAGATATACAAATGGAATGTTCCTCATAACCACCCTCTCCATAAACCCGAGCATTCACATTACGCGAGATCATCTCGAGATATTAGTGAGCCTAAAAAAAAACTTGCTATAATAAATTCGAAAGCAGGCATGTCTATAAGATCCTCCTTTCTAGTTATGCGTCAAATAGCTGGTGGTTCAAAGAACCTTGGGTATTGCTTCCAAGATTTAAAGAACTTTCTCACCACTTTTTGA 603 0.3748 MSLKMLVLTPMKIKNPGKHFVFHDLSSIKDFYAKYAHVKGFSLRRNLHSFYDSRNKKTDIVQYVRYVCKKHCFKHGSRADPKNKTNSDTPVLIEFQKDKELPEERTGCPASILLKYDSNSKGYQIYKWNVPHNHPLHKPEHSHYARSSRDISEPKKKLAIINSKAGMSIRSSFLVMRQIAGGSKNLGYCFQDLKNFLTTF 200
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vivi999g00006 200 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 21 182 - -
Vivi999g00006 200 Pfam FAR1 DNA-binding domain 30 137 IPR004330 -
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi999g00006 FAR1 2.8e-12 CL0274
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi999g00006 - - vvo:131636111 343.199