Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi998g00015 ATGAAAGAAAATATGGATGATGGAAATTCCGAGGTTTCTGATAAACTTTCAGATAATAATCTATTTTCAACTCCCGAATCTATGAAAACAGATACTGAATTACCTAAGGGCACTACCAAAACATGCACTCACACTCACACTTGTAATCCACCTGGTTTCGATTTTGACGATTCTATTCATACGCACACGTGTTTTCACACGCACACTCATGTTTTTGCTTCCGAAGACGACACGAATTCGAGACCAAAAAGGACTTCTTGTAATAGAGACGCTGTTAAGAAGTATAGGGAGAAGAAGAAGGCGCAGACGGCTTATTTGGAGGAAGAAGTTAAGAAGTTGAAACTTATTAATCAACAACTTATGAGGAGATTACAAGGGCAGGCGGTACTTGAAGCGGAATTGTTAAGGTTGAGGAACACTTTGGTTCAACTTAAGGGAAAAGTTGACTGTGAATTAGGTTCTTTCCCTTTTCAAAAGAAGTGTTTCTCTTCTAGTGTTTATAAAGGAGATGCTAATTTGGTTTCGGCTTCTCAGGGAGTTGATCTTGAGTTATGTAGCAACGATACTTCTGATTGA 576 0.3854 MKENMDDGNSEVSDKLSDNNLFSTPESMKTDTELPKGTTKTCTHTHTCNPPGFDFDDSIHTHTCFHTHTHVFASEDDTNSRPKRTSCNRDAVKKYREKKKAQTAYLEEEVKKLKLINQQLMRRLQGQAVLEAELLRLRNTLVQLKGKVDCELGSFPFQKKCFSSSVYKGDANLVSASQGVDLELCSNDTSD 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi998g00015 191 SMART brlzneu 75 143 IPR004827 GO:0003700|GO:0006355
Vivi998g00015 191 Coils Coil 127 147 - -
Vivi998g00015 191 MobiDBLite consensus disorder prediction 14 38 - -
Vivi998g00015 191 MobiDBLite consensus disorder prediction 1 38 - -
Vivi998g00015 191 CDD bZIP 88 125 - -
Vivi998g00015 191 Pfam Basic region leucine zipper 78 132 IPR004827 GO:0003700|GO:0006355
Vivi998g00015 191 PANTHER CCAAT/ENHANCER BINDING PROTEIN 26 156 IPR031106 GO:0003700|GO:0006351
Vivi998g00015 191 SUPERFAMILY Leucine zipper domain 88 142 IPR046347 GO:0003700|GO:0006355
Vivi998g00015 191 Gene3D - 68 146 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi998g00015 38 177 bZIP Transcription Factor Family AT3G51960 50.676 1.16e-46 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi998g00015 bZIP_2 4.5e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi998g00015 K25785 - gmx:100527780 202.216