Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi998g00010 ATGGCTGCAACTATGATTGGAAGCGCTTTCCTCTCAGCAACTGTTCAAACCTTAGTTGAGAAACTTGCTTCCAAAGAGTTTCTTGATTACTTCAAAAACACCAAACTCGATGACTCACTCTTGGAACAGTTAAGAGCACCACTACTCACTCTTAATGTTGTGCTAGATGCTGCAGAGGAGAAGCAGATCAACACTCCTTCTGTCAAAGACTGGCTTGACGGCTTGAAAGATGCTGTCTACGACGCTGAAGATCTGCTCAACCAAATCAGCTATGACTCCCTTCGATGCAAGATGGAGAACACGCAACCTGCAAGCAAAACTAAACAGGTCTGGAACTTCTTTTTTTCTCCTGCAAATAACTATGAAGAGATCAATTCCCAAATGAAAAAAATATACTTAAACCTGAAACATTTCGCTGAAAATAACGATATCATTAGCTTGCAAACTAAAAGTGTCAGAGTTTCTCATAGAACACCTTCCAGTCCTATGTTCAATGAATCTGTCATGGTTGGTAGGAAAGATGACCAAGAGAAAGTAACAAACATGTTGCTATCAGAAAGCAATACTAATATAGGCATAGTTGCAATTCTAGGCATGGGAGGTGTCGGAAAAACAACACTTGCACAACTTGCTTACAATGATGAAAATGTTCAAAAGCACTTTGATCTCACAGCATGGGCTTGTGTATCAGAAGATTTTGATGTTTTTAGAGTAACCAAAACTCTCCTAGAATCTGTCACTAAATCACCATGGGAAACCACTAATCTCGATTTACTTCGAGTTGAGTTAAAGAAAAATTTGAGGGACAAAAGATTCTTCATTGTGTTGGATGACTTATGGAATGACAGTTGTTCTGATTGGGAAGATCTTGTATCGCCGTTGATTTATGGAAAAAATGGAAGCAGAGTGATCATCACCACACGCCACAAAAAAGTGGCAGATGCTGCACGCACATTTCCTATTTTTGAATTAGATCCTCTATCAGATGAAGACAATTGGTCTTTACTCTCCAAATGTGCATTTGGAAGTGGAGACTTTTCTGAAACTCAAAAGAGAAATGTAGAAGCAATAGGAAGGAAGATTGCAAGAAAGTGTGGTGGATTGCCAATTGCTGCGAAATCACTTGGAGGACTATTGCGTTCGAAAGTAGATCCTGAAGAGTGGATTGAAGTTCTGAACAACGACATATGGAACTTAAAGGATGATAATATTCTGCCTGCATTGCGCTTGAGTTATCGATATCTTTCCTCTCAATTGAAAAGATGTTTTTCCTATTGCTCTATTTTTCCAAAGGACTATCCACTTGATAGGAAGCAATTGGTTTTGTTGTGGATGGCAGAAGGCTTCCTTGATCATTCTCAAGACAAAAAAACCATGGAAGAAGTAGGTGATGAATGTTTTACTGAATTGTTATCCAGATCATTGATTCAGCAATTGCATAATGATTCTAGTGGACAGAAATTTGTCCTGCATGACCTTGTTAATGATTTAGCTACGGTCGTATCTGAAAAATGTTGTTACAGACTTGAATTTGGTGCTAAGAGCTCTGAAACTGTTCGCCACTTGTCATATATTAAAAAAAGATATGACATTTTCAAGAAGTTTAAGACTTTTGACAAATTCAAACGCTTGAGAAGCTTCCTTGGCTTTGACCCTGGATGTGCATCAAATAATTTATCAAGAAAGGTGGTCGAAGATTTGCTACCCACATTTGGAAGGTTGCGTGTGTTATCGTTATCAAAATATAGAAACATCACCATGCTACCCATTACAATTGGCAATTTAGTGCAGTTGCGCTATCTAGATCTCTCTTACACGAATATCGCAAGATTGCCTGGCACCATATGCAATCTCTATTACTTGCAAACCTTGATTTTATCTTGCTGCTCAAAACTCACAGAATTGCCTGAACATGTTGGAAAATTAAGTAATTTGCGTCATCTTTATATTGATAGGACAAGCATATCAGAGATGCCGAAGCAAATTGCTGAACTAGAAAACCTTCAAACTCTAACTCTTTTTGTAGTAGGCAAGAAACATATTGGTTTAAGTGTTAGAGAGCTTGGGAAGTTTCCTAAGCTACGGGGAAAGTTACTCATCAAGAACCTGCAAAATGTCAATGATGTCATGGAGGTAAGTGGTACCAACTTGAAGAGCAAAGAACATATTGAGGAATTGACGCTAGAGTGGGGCAAGGAAACTGATGACACACTTAATGAAAAAAATGTGCTTGATATGTTAAAACCATCTACAAACCTAAAGGAACTGAGAATTGTATCATATGGTGGGACAAGTTTTCCAAGTTGGTTTGGAGATCCTTCTTTTTCTAACATGGTGTCCCTCAGCATTAGTAATTGTGAGAATTGCACGACACTTCCATCACTAGGGCAGCTACCTTCTCTCAAGGACTTGCTAATTGGTAGAATGACAATTTTGGAGACAATTGGGCAGCAGTTCTATGGCATGGCAGCAGGAGGTTCCAGTTCTTCGTTCCAACCATTTCAAGCCCTTGAGAATTTGGACTTTTTGTTCATGGAAAATTGGAAGGAATGGTGTCCTTTTCCAAACAACATGTTTCCTTTTCCTCGTCTGAAAACCCTGAAGTTATTCAAGTGTCCAAAATTGAAAGGACATTTACCTAGTCATCTTCCTTCCTTAGAAGAGATTGAAATATATGATTGTGATCATCTCTTGGCAACACCACCTACTCAACATTGGCTCTCCTCAATAAAAAAGATTCGTATTGTGGAAGATTCAGATTCAATAAGCAATACTGAAAGGACCCAATACTCATTGCTCGAGAGTGATTCTCCATGTCTGCTGCAAACAATAGACATATGGAGCAGTCATATGCTAAAATCTGTACCTAAATTGATTTTAAACAGCACTTGTCTTCGACGATTGGATCTCAATCATATTAGTTCTCTCACTACGATTCCAACAAATGGTTTACCCACTTCTTTGCAATCACTTCGTATTCAAAAATGTGAGAACTTAACATTCCTTCCTCCTGAAATGTGGAGCAATTACACATCCCTTGTGACTCTTAGATTAGACTACTGCAATTCAATTACCTCCGTCCCATTGAATTGTTTTCCTATGCTCCAAAATTTTTCCATCTATGATTGCAACAGTTTGGAATCTATTTTTATTTCAGAAACTTTGCCTTGTAGCTCGTCAGCCCTCAAATCTTTTCATGTCAATTCTTGCGAGGAACTTAGATCACTACCTCAACGGATGGACACCCTCACCACTCTTGAATCGTTATTTCTAAAGAATCTTCCAAATCTGAATTTATCATTATGTGAAGGAGCTTTCCTACCTCCCAATTTACAATCAGTTAGTGTTGAATCTGTGAGGATAACAAAGCCGGTAAGAGAATGGGGTTTCCAATGTCTCACTGCTCTTTCATCATTGCATATCAAAGGTGATGCTATTGTGAACATATTGCTCAAAGAGCCGTTGTTACCCATTTCCCTTGTGTGTCTAGAAATCAATGATCTCTCTGAAATGAAATCCTTAGAAGGAATTGGACTTCGACACCTCTCCTCTCTAGAAACCCTTTCTTTTAATGGTTGTCCGGGGCTTGTGTCATTGACAGAAAAAGCCTTTCCCTCCTCGCTGAAAACACTTAGTTTTTATAAGTGTACAACACTAAAGTCATTGCCAGAAAAAGCCTTTCCCTCCTTGCTGAAAACACTTTCTTTACGCAGTTGTCCAAGACTAGAGTCATTGCCAGAAGACAGTCTCCCTACCTCTTTGGAAGAACTGTCCATTGGAGGATGCCCATTGTTAGAAGAAAGGTATAAAAGGAAGGAACATTGGTCCAAAATTGCTCACATCCCAGTCATACAAATAAATGACCAACTCACAATATGA 3879 0.3875 MAATMIGSAFLSATVQTLVEKLASKEFLDYFKNTKLDDSLLEQLRAPLLTLNVVLDAAEEKQINTPSVKDWLDGLKDAVYDAEDLLNQISYDSLRCKMENTQPASKTKQVWNFFFSPANNYEEINSQMKKIYLNLKHFAENNDIISLQTKSVRVSHRTPSSPMFNESVMVGRKDDQEKVTNMLLSESNTNIGIVAILGMGGVGKTTLAQLAYNDENVQKHFDLTAWACVSEDFDVFRVTKTLLESVTKSPWETTNLDLLRVELKKNLRDKRFFIVLDDLWNDSCSDWEDLVSPLIYGKNGSRVIITTRHKKVADAARTFPIFELDPLSDEDNWSLLSKCAFGSGDFSETQKRNVEAIGRKIARKCGGLPIAAKSLGGLLRSKVDPEEWIEVLNNDIWNLKDDNILPALRLSYRYLSSQLKRCFSYCSIFPKDYPLDRKQLVLLWMAEGFLDHSQDKKTMEEVGDECFTELLSRSLIQQLHNDSSGQKFVLHDLVNDLATVVSEKCCYRLEFGAKSSETVRHLSYIKKRYDIFKKFKTFDKFKRLRSFLGFDPGCASNNLSRKVVEDLLPTFGRLRVLSLSKYRNITMLPITIGNLVQLRYLDLSYTNIARLPGTICNLYYLQTLILSCCSKLTELPEHVGKLSNLRHLYIDRTSISEMPKQIAELENLQTLTLFVVGKKHIGLSVRELGKFPKLRGKLLIKNLQNVNDVMEVSGTNLKSKEHIEELTLEWGKETDDTLNEKNVLDMLKPSTNLKELRIVSYGGTSFPSWFGDPSFSNMVSLSISNCENCTTLPSLGQLPSLKDLLIGRMTILETIGQQFYGMAAGGSSSSFQPFQALENLDFLFMENWKEWCPFPNNMFPFPRLKTLKLFKCPKLKGHLPSHLPSLEEIEIYDCDHLLATPPTQHWLSSIKKIRIVEDSDSISNTERTQYSLLESDSPCLLQTIDIWSSHMLKSVPKLILNSTCLRRLDLNHISSLTTIPTNGLPTSLQSLRIQKCENLTFLPPEMWSNYTSLVTLRLDYCNSITSVPLNCFPMLQNFSIYDCNSLESIFISETLPCSSSALKSFHVNSCEELRSLPQRMDTLTTLESLFLKNLPNLNLSLCEGAFLPPNLQSVSVESVRITKPVREWGFQCLTALSSLHIKGDAIVNILLKEPLLPISLVCLEINDLSEMKSLEGIGLRHLSSLETLSFNGCPGLVSLTEKAFPSSLKTLSFYKCTTLKSLPEKAFPSLLKTLSLRSCPRLESLPEDSLPTSLEELSIGGCPLLEERYKRKEHWSKIAHIPVIQINDQLTI 1292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi998g00010 1292 PANTHER DISEASE RESISTANCE PROTEIN RP 69 895 IPR044974 GO:0006952
Vivi998g00010 1292 FunFam Probable disease resistance protein At1g63360 412 500 - -
Vivi998g00010 1292 PRINTS Disease resistance protein signature 365 379 - -
Vivi998g00010 1292 PRINTS Disease resistance protein signature 193 208 - -
Vivi998g00010 1292 PRINTS Disease resistance protein signature 593 609 - -
Vivi998g00010 1292 PRINTS Disease resistance protein signature 266 280 - -
Vivi998g00010 1292 Gene3D - 150 319 IPR027417 -
Vivi998g00010 1292 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 426 IPR027417 -
Vivi998g00010 1292 SUPERFAMILY L domain-like 937 1267 - -
Vivi998g00010 1292 Gene3D - 417 499 IPR036388 -
Vivi998g00010 1292 SMART LRR_typ_2 642 665 IPR003591 -
Vivi998g00010 1292 SMART LRR_typ_2 595 618 IPR003591 -
Vivi998g00010 1292 Pfam Rx N-terminal domain 10 105 IPR041118 -
Vivi998g00010 1292 Gene3D - 326 416 IPR042197 -
Vivi998g00010 1292 Gene3D Ribonuclease Inhibitor 536 916 IPR032675 -
Vivi998g00010 1292 Pfam NB-ARC domain 173 394 IPR002182 GO:0043531
Vivi998g00010 1292 SUPERFAMILY L domain-like 490 915 - -
Vivi998g00010 1292 Gene3D - 14 130 - -
Vivi998g00010 1292 FunFam Probable disease resistance protein At1g61300 152 318 - -
Vivi998g00010 1292 Gene3D Ribonuclease Inhibitor 937 1101 IPR032675 -
Vivi998g00010 1292 Gene3D Ribonuclease Inhibitor 1102 1271 IPR032675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi998g00010 183 815 WRKY Transcription Factor Family AT5G45050 20.846 1.80e-08 57.4