Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi995g00009 ATGACACAAACCAAACCGCTAAAATCCTTTTCTCCAAAAACACAAGGAATATCAACACAACACACAACACCAAACTCTTCCCAACGATTCAACTCAACTCAACTCAGTCATGCACGCATGCACTTCACTTTCCCAATTCCCTTCCTTGATTCTATCCAATTCCCCTTAGATCAATCCCCAATGTCGAATCCCATCCTTTCCATATCCGCAATCGGTGGATTGAGAATTTTTCAGTGCATTTTGCTGAAAACATCGCTTGTGTTATTAATATTATGCAGCACAGTGTTAATAGTTGGCTCTGGTTTTCCAGTTACACAAATTCCTTCTGTTATGGCTCACCCCCCATTGTCCTCTTATCTTTCCAATTATTGTAAAAAAGACATGGTATTGAAGCGAGGTACTAGTGAGGGTTTCCGTTGCGTTTATCCTGTAAAGTTAGACCTTCTTCTTTTGAATGTGTCTCAAAACCCTGACTGGAAGCTTTTTCTTGATGAATTGGCTGCACAATTGGGGATGCGGGCTACCCAAATTGAACTGATAAACTTTTATGTACACAGCTTATCGATGTTGAATATATCGATGTATATTACTCCGCCAAAAGATATCAGTTTCTCTGCCTATGAAGCATCTAATATAAAGGCTTCCCTTATTTTTCACAAGGTTAGACTAGACAGTAGATTCGTGGGGGACTACAGGGTTCTCAATTTGACCTGGTTTAAACCTCCACCTCCTTCGAAAGATCCTACTTTTGCTGCATCAACTGTGAAAACTCCTGGGAGACAAGAACTTGCTGCTACATCATTGAGTACTTCAGACAGGGGAAGGCATTCAAATTTGGTTGTTATCCTTGGAATTGTTACTGGGATACTCATCATTTCCATTATATGTCTACTTATACTTTGTTTATGCACGCTGAAACCAAAGACAAAAGCACCTCCTACAGAAACAGAAAAGCCAAGTATAGAACATACAATTTCATCTGTCGGGTCACTTCCATATCCAACCAGTACACGTTTTATTTCTTATGAAGATCTTAGAGAAGCAACAAACAATTTTGAACCAGAAAGCATACTTGGAGAAGGAGGTTTTGGTAGAGTTTTTAAAGGTGTCTTGAATGATGGAACTGCTGTTGCAATTAAGAGGCTTACTAATGGAGGGCAGCAGGGTGACAAAGAGGTTTTGGTTGAGGTTGAGATGCTTAGCCGGTTGCATCACCGTAACCTTGTAAAACTAGTTGGATACTATAGCAATCCTGACTTATCACAAAACCTACTTTGCTATGAACTTGTCCCTAATGGAAGTTTGGAGGCCTGGCTTCATGGTCCCTTGGGAATAAACTGCCCTTTGGAGTGGGACACCAGGATGAAGATTGCACTTGATGCTGCAAGAGGACTTGCTTACTTGCATGAAGATTCACAGCCATGTGTCATACACAGAGATTTCAAAGCATCTAATATATTGCTTGAGAACAACTTTCATGCTAAAGTTGCTGATTTTGGTCTCGCTAAACTAGCCCCTGAAGGAGGAGCTAATTACCAGTCTACTCAAGTCATGGGCACATTTGGGTATGTAGCACCTGAGTATGCCATGACCGGACACCTACTCATTAAAAGCGATGTTTATAGCTACGGGGTTGTCTTGCTAGAACTGTTGACTGGAAAGAAACCTGTGGAAATGTCACAGCCAACTGGGCAAGAGAATCTTGTAACTTGGGCAAGGCCAATTCTTAGAGATAAAGAGCGGTTAGAAGAACTTGCTGATCCAAGGCTTGGAGGAAGGTATCCGAAGGAAGATTTTCTCCGTGTTTGCACTATTGCTGCAGCCTGTGTTGCACCTGAAGCAAGCCAACGACCTACAATGGGTGAAGTGGTACAGTCACTTAAAATGGTGCAGCACATAACTGAAAATCACGATCATGCATTACCGTCATCTAATACAAGGGGTAACCTGAAACAGTCTTCTACAGCTTATGATTCTGATGGGACATCTTCAATGTTTTCTTCTGGTCCTCACTCTTGCCTAAGCACCTTTGACTATGAGAGCATTTCTAGGACAGCTGTTTTCTCTGAAGATCTTCATGAAGGACGGTGA 2091 0.4165 MTQTKPLKSFSPKTQGISTQHTTPNSSQRFNSTQLSHARMHFTFPIPFLDSIQFPLDQSPMSNPILSISAIGGLRIFQCILLKTSLVLLILCSTVLIVGSGFPVTQIPSVMAHPPLSSYLSNYCKKDMVLKRGTSEGFRCVYPVKLDLLLLNVSQNPDWKLFLDELAAQLGMRATQIELINFYVHSLSMLNISMYITPPKDISFSAYEASNIKASLIFHKVRLDSRFVGDYRVLNLTWFKPPPPSKDPTFAASTVKTPGRQELAATSLSTSDRGRHSNLVVILGIVTGILIISIICLLILCLCTLKPKTKAPPTETEKPSIEHTISSVGSLPYPTSTRFISYEDLREATNNFEPESILGEGGFGRVFKGVLNDGTAVAIKRLTNGGQQGDKEVLVEVEMLSRLHHRNLVKLVGYYSNPDLSQNLLCYELVPNGSLEAWLHGPLGINCPLEWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKLAPEGGANYQSTQVMGTFGYVAPEYAMTGHLLIKSDVYSYGVVLLELLTGKKPVEMSQPTGQENLVTWARPILRDKERLEELADPRLGGRYPKEDFLRVCTIAAACVAPEASQRPTMGEVVQSLKMVQHITENHDHALPSSNTRGNLKQSSTAYDSDGTSSMFSSGPHSCLSTFDYESISRTAVFSEDLHEGR 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi995g00009 696 ProSitePatterns Protein kinases ATP-binding region signature. 358 380 IPR017441 GO:0005524
Vivi995g00009 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Vivi995g00009 696 PANTHER OS01G0750732 PROTEIN 117 654 - -
Vivi995g00009 696 Pfam Protein kinase domain 353 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi995g00009 696 MobiDBLite consensus disorder prediction 638 665 - -
Vivi995g00009 696 FunFam Receptor-like serine/threonine-protein kinase ALE2 332 429 - -
Vivi995g00009 696 SUPERFAMILY Protein kinase-like (PK-like) 326 631 IPR011009 -
Vivi995g00009 696 FunFam Receptor-like serine/threonine-protein kinase ALE2 430 646 - -
Vivi995g00009 696 ProSiteProfiles Protein kinase domain profile. 352 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi995g00009 696 Gene3D Phosphorylase Kinase; domain 1 334 429 - -
Vivi995g00009 696 Gene3D Transferase(Phosphotransferase) domain 1 430 650 - -
Vivi995g00009 696 MobiDBLite consensus disorder prediction 1 30 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi995g00009 107 696 Receptor kinase-like Gene Family AT4G02010 68.919 0.0 835
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Vivi995g00009 Pkinase 1.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi995g00009 - - gmx:100792818 915.99