Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi995g00005 ATGGAGAAGAAAGAGATGGGTGTGATGAGTGTGAAGAGTGAAGAAGATGTTGTTGTTGGTGGTGATTCTTCATCTTTGTTAAACGGTTTTCAGTTTTCTAGCGTGTTTGATTTCAGTGATGCAGAAAAAAGCTCTTCTTTAGGGTTTATGGAATTACTGGGTGTGGAAAACTATAGTTCTTTGCTTGATGTGCCTCAACTATCAACCATGAGTCATCATCAAACTACAGTTAAATCTTCATCTGATAATAATGGAAAAGAGTGTTCTGAGGTTTTGAATCAACTGCCTCAAACTCCTAACTCTTGCTCGATTTCATCGGCTTCTAGTGAAGCAGTTAATGATGAACAACGCAGTAAGACTCTTGTTGACCAAGTCCAAGAAGATGAAGAAGAAAAACTAAAAACCAGTAAACAGTTGAAGACTAAGAAGACAAATCAAAAGAGACAGAGAGAACCAAGATTCGCGTTCATGACGAAAAGCGAGGTGGATCATCTGGAAGATGGGTACAGATGGAGAAAGTACGGTCAAAAAGCTGTCAAGAACAGCCCCTTTCCAAGGAGCTATTATCGCTGCACCACTGTTTCATGTAATGTGAAGAAACGTGTGGAGCGTTCTTATACTGATCCTACCATTGTTGTCACAACTTATGAAGGCCAGCACATTCATCCAAGTCCAGCTATGTCCCGTTCCGCCTTTGCCGGAGTTCAGATACCACCACCGACCGCTGTTTCAGGTGGGTTTCCTACTAACTTTGGTTCAGTTTTGCAAGGGAACTACTTATCATCACAGTATCAGCAGCAGCAACAACACCATCAGAATCATCAACAACTGGTTAATACATTGTCCTCTTTGAGTAACCCTTATAATTACAATTCGTCTGCTTTTACTCAAGAGAGGAAGCTTTGTAATCCAGGGACAACTACTTCCTTTCTTAGGGACCATGGTCTTCTTCAAGATGTTGTTCCTTCACATATGTTGAAAGAAGAGTAA 990 0.4081 MEKKEMGVMSVKSEEDVVVGGDSSSLLNGFQFSSVFDFSDAEKSSSLGFMELLGVENYSSLLDVPQLSTMSHHQTTVKSSSDNNGKECSEVLNQLPQTPNSCSISSASSEAVNDEQRSKTLVDQVQEDEEEKLKTSKQLKTKKTNQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTTVSCNVKKRVERSYTDPTIVVTTYEGQHIHPSPAMSRSAFAGVQIPPPTAVSGGFPTNFGSVLQGNYLSSQYQQQQQHHQNHQQLVNTLSSLSNPYNYNSSAFTQERKLCNPGTTTSFLRDHGLLQDVVPSHMLKEE 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi995g00005 329 Pfam WRKY DNA -binding domain 166 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi995g00005 329 SMART WRKY_cls 165 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi995g00005 329 FunFam WRKY transcription factor 57 151 225 - -
Vivi995g00005 329 PIRSF WRKY_txn_fact_IIc 1 329 IPR017396 GO:0003700
Vivi995g00005 329 MobiDBLite consensus disorder prediction 95 115 - -
Vivi995g00005 329 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 89 275 IPR044810 GO:0003700
Vivi995g00005 329 SUPERFAMILY WRKY DNA-binding domain 157 225 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi995g00005 329 MobiDBLite consensus disorder prediction 116 138 - -
Vivi995g00005 329 Gene3D WRKY domain 152 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi995g00005 329 MobiDBLite consensus disorder prediction 95 150 - -
Vivi995g00005 329 ProSiteProfiles WRKY domain profile. 160 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi995g00005 34 329 WRKY Transcription Factor Family AT2G47260 48.476 1.15e-68 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi995g00005 WRKY 3.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi995g00005 - - gmx:100784158 372.089