Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi991g00002 ATGAGTTTTGTTTTTCGAGGTGCAAGAGGTGATATAGAAAATGGGTTTCCAGGATTTATACCCGAGAGGCGTGCATTGCGTGTTCATGCAGCACGACCTAGCAATTCCAACTCACTCACTTTTCTCGTAACAGTTCTCCTGTTATTCATGATACTGAACTCCCACCAGATGTCACCAAATTTTCTGCTCTGGCTAGTGCTTGGTGTTTTTTTGATGGCTACAATGCTAAGGATGTATGCAACATGTCAACAGCTTCAAGCCCAGGCCCAAGCTCATGCAGCAGCAGCCAGTGGTCTTCTTGGCCATACAGAACTGCGGTTGCATATGCCTCCATCAATAGCACTTGCAAGCCGAGGGCGTCTGCAGGGTCTCAGACTTCAGCTGGCACTTCTTGATCGGGAGTTTGATGATCTAGATTATGAAACTTTAAGAGCTCTGGATTCGGATAATGTTTCTACTGCACCTTCTATGACTGAAGAAGAGATAAACGCTCTTCCAGTTCACAAATACAAGGTTTCTGTTCCCCAAAAAAGTAGCTCCTCAATGCAACAAGCACCCCCATCCACTTCTGCTGAGAAAACACAGGATAATTCAAATTCGGTTGGAAACACAAAAGTCTCAGATGATGATCTCACCTGCAGTGTATGCTTGGAGCAGGTTAATGTTGGAGATGTACTTCGTAGCTTGCCCTGCCTTCATCAGTTTCATGCTAATTGCATTGATCCTTGGTTGCGGCAACAAGGGACGTGCCCTGTTTGCAAATTTCGAGCAGGATCTGGGTGGAATGACGGTGGACATAATGATATCGCTGACATGGTTTGA 822 0.455 MSFVFRGARGDIENGFPGFIPERRALRVHAARPSNSNSLTFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATMLRMYATCQQLQAQAQAHAAAASGLLGHTELRLHMPPSIALASRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVSTAPSMTEEEINALPVHKYKVSVPQKSSSSMQQAPPSTSAEKTQDNSNSVGNTKVSDDDLTCSVCLEQVNVGDVLRSLPCLHQFHANCIDPWLRQQGTCPVCKFRAGSGWNDGGHNDIADMV 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi991g00002 273 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 188 259 IPR013083 -
Vivi991g00002 273 PANTHER TARGET OF ERK KINASE MPK-1 1 259 - -
Vivi991g00002 273 SMART ring_2 213 253 IPR001841 -
Vivi991g00002 273 CDD RING-H2_PA-TM-RING 212 254 - -
Vivi991g00002 273 Pfam Ring finger domain 212 254 IPR001841 -
Vivi991g00002 273 ProSiteProfiles Zinc finger RING-type profile. 213 254 IPR001841 -
Vivi991g00002 273 SUPERFAMILY RING/U-box 207 257 - -
Vivi991g00002 273 MobiDBLite consensus disorder prediction 173 204 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi991g00002 1 273 C3H Transcription Factor Family AT3G55530 77.536 4.76e-145 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi991g00002 K16283 - gmx:100777936 455.292