Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi98g00034 ATGAAACATATCATCATGCCAATTCATCTTCAATTCTTGATATCAGTTTTGCTGTTCCTCTCTGTGCCAGTTCTATCCCAACTTGACCACCTCATGTTTGCAGGATTCAAGGATGTTGATCCCAACAATCTAACCTTGAATGGAATTGCAGAGATAGAGAAAAACGGCATCATAAAGTTAACAAATGAAACAAGCAAATTATTGGGCCATGCTTTCTACTCTCAACCTATTCAGATAAAGAATTCAACAACTGGTAAAGCTTTCTCCTTTTCTTCATGTTTTGCTATTGCTATTGTTCCTGAGTATCCTAGACTTGGCGGTCACGGCATGGCTTTCACAATAGCACCTAGAAAAGATCTCAAGGCTTTACCTATTCAGTATCTTGGTCTTCTCAATTCAAATGATGTTGGTAATTTCTCTAACCATCTTTTTGCTGTTGAGTTTGACACTGTTCAAGACTTTGAGTTTGGTGATATCAATGATAACCATATTGGAATAGACATCAATAGTTTGCAGTCAAATGCATCTGTTAATGCAAGCTATTACACTGATGATTCAACTTTACAGAATCTTAATCTCAAAAGTGGGAAACCGTTTCTTGTTTGGGTTGATTACGATTCTTCATCGGATCTTATTAGTGTTACACTTTCTCCAACTTCAACCAAACCGAAAAAACCATCCTTGTCTTTTACTATGGATCTATCACCTATTTTTCATGATACTATGTATCTTGGTTTCTCTGCTTCAACTGGTTTACTTTCTAGCTCTCATTATGTTTTGGGTTGGAGTTTCAAAATCAATGGACCAGCACCTTTTCTTGATTTGTCTTCACTACCGCAACTTCCACAGCCAAAGTCGAAACAAACTTCTTTGATAACCGGTGTTTCAGTCACAGCTTGTGTTATTGTATTATGTTCTATAGCAGTTTCTATTTACCTTTTCAGAAAAATCATGAACGCTGATGTAATCGAAGCGTGGGAGCTTGAAATTGGACCACATAGATACTCCTATCAAGAGCTTAAGAAGGCTACAAAAGGCTTCAAGGAGAAAGAGCTACTCGGGCAAGGCGGTTTCGGAAGAGTTTATAAAGGGACATTACCGAAATCAAAAGTCCATGTAGCTGTCAAGAGAGTTTCACATGAATCAAAACAAGGGCTGAGGGAATTCGTATCGGAAATCGCAAGCATAGGCCGGCTTCGCCATAGAAATTTAGTTCCGTTACTCGGATGGTGTCGTCGTAGAGGCGACCTTTTACTTGTATACGATTTCATGGCGAATGGAAGCTTAGATAAATATTTGTTTGAAGATTCGGAAAATGTGCTAAGTTGGGAACAAAGGTTTAAGATAATAAAAGGGGTTGCTTCGGGCCTTTTGTTTCTACATGAAGGGTATGAGCAAGTGGTAATACATAGAGATGTTAAAGCTAGCAATGTGCTGTTAGATTTTGAATTCAATGGAAGATTAGGTGATTTTGGATTGGCCAGGTTGTATGAACATGGTGCTAATCCAGGAACCACAAGAGTGGTAGGAACATTAGGCTATTTGGCACCAGAGTTGCCTAGAACAGGAAAGGCTTCAACAAGCTCTGATGTATTTGCATTTGGCGCGCTTCTGCTCGAGGTTGCTTGCGGAAGAAGGCCCATTGAGCCTAAGGCATTACCAGAAGAGTTAGTGTTGGTGGATTGGGTTTGGGATAGGTTCAAAGAAGGAAGAGTACTTGAAGTAGTGGATCCTAAAATGGATGGTGATTTTGTTGAAAGTGAGGTAATGATGGTGTTGAAATTGGGATTGATGTGTTCAAATGATGTTCCTACTATAAGGCCTAACATGAGACAAGTAGTTAGGATTTTGGATGGAGAAGTTGAGTTACCAAATGAAATGAGAAAGCCAAGAGGTGTTGAACCACAAGAAGGATTTGATGAATTCTTGCTTGCTCTTGGAACTTCTTCTTCATATGAAAAGACAAATTCAAACTCCTAG 1980 0.3909 MKHIIMPIHLQFLISVLLFLSVPVLSQLDHLMFAGFKDVDPNNLTLNGIAEIEKNGIIKLTNETSKLLGHAFYSQPIQIKNSTTGKAFSFSSCFAIAIVPEYPRLGGHGMAFTIAPRKDLKALPIQYLGLLNSNDVGNFSNHLFAVEFDTVQDFEFGDINDNHIGIDINSLQSNASVNASYYTDDSTLQNLNLKSGKPFLVWVDYDSSSDLISVTLSPTSTKPKKPSLSFTMDLSPIFHDTMYLGFSASTGLLSSSHYVLGWSFKINGPAPFLDLSSLPQLPQPKSKQTSLITGVSVTACVIVLCSIAVSIYLFRKIMNADVIEAWELEIGPHRYSYQELKKATKGFKEKELLGQGGFGRVYKGTLPKSKVHVAVKRVSHESKQGLREFVSEIASIGRLRHRNLVPLLGWCRRRGDLLLVYDFMANGSLDKYLFEDSENVLSWEQRFKIIKGVASGLLFLHEGYEQVVIHRDVKASNVLLDFEFNGRLGDFGLARLYEHGANPGTTRVVGTLGYLAPELPRTGKASTSSDVFAFGALLLEVACGRRPIEPKALPEELVLVDWVWDRFKEGRVLEVVDPKMDGDFVESEVMMVLKLGLMCSNDVPTIRPNMRQVVRILDGEVELPNEMRKPRGVEPQEGFDEFLLALGTSSSYEKTNSNS 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi98g00034 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Vivi98g00034 659 Gene3D - 30 267 - -
Vivi98g00034 659 Pfam Protein tyrosine and serine/threonine kinase 349 616 IPR001245 GO:0004672|GO:0006468
Vivi98g00034 659 FunFam L-type lectin-domain containing receptor kinase S.4 27 271 - -
Vivi98g00034 659 Gene3D Phosphorylase Kinase; domain 1 332 423 - -
Vivi98g00034 659 CDD STKc_IRAK 353 619 - -
Vivi98g00034 659 ProSiteProfiles Protein kinase domain profile. 347 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi98g00034 659 Pfam Legume lectin domain 32 278 IPR001220 GO:0030246
Vivi98g00034 659 PANTHER - 36 624 - -
Vivi98g00034 659 Gene3D Transferase(Phosphotransferase) domain 1 424 633 - -
Vivi98g00034 659 SUPERFAMILY Concanavalin A-like lectins/glucanases 35 286 IPR013320 -
Vivi98g00034 659 SUPERFAMILY Protein kinase-like (PK-like) 329 625 IPR011009 -
Vivi98g00034 659 SMART serkin_6 347 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi98g00034 659 ProSitePatterns Protein kinases ATP-binding region signature. 353 376 IPR017441 GO:0005524
Vivi98g00034 659 FunFam L-type lectin-domain containing receptor kinase S.4 424 630 - -
Vivi98g00034 659 FunFam Lectin-domain containing receptor kinase A4.3 332 423 - -
Vivi98g00034 659 CDD lectin_legume_LecRK_Arcelin_ConA 33 268 IPR001220 GO:0030246
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi98g00034 24 630 Receptor kinase-like Gene Family AT3G55550 60.912 0.0 758
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vivi98g00034 PK_Tyr_Ser-Thr 2.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi98g00034 - - gmx:100784346 991.875