Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi98g00033 ATGCAACTTCAAACCCATCTCAAACTCATCCTATCATTTTCATTCCTCCTCTTTCTCCCAACCCTCTCCCAAATTGACCAGCTCCTATATCCAGGCTTCAAGAACACTGGTCCTAAAAATCTCACCTTGAATGGAATATCAGAGATTGAAAAAAATGGAATGATAAGACTAACAAATGAAACAAGCAGATTAATGGGTCATGCTTTCTACCCTTCACCTTTCCAACTAAAGAACAAAACAACCGGTAAAGTTTTCTCCTTTTCTTCATCTTTTGCTCTTGCTGTTGTTCCTGAGTATCCCAAACTAGGTGGCCATGGCATGGCTTTCACGATAGCACCTACAAAGGATCTCAAAGCTTTGCCTAGTCAGTATCTTGGTCTTCTCAATTCAAGTGATGTTGGTAATTTCTCTAACCATCTTTTTGCTGTTGAGTTTGACACTGTTCAGGATTTTGAGTTTGGTGATATTAATGATAACCATGTTGGGATTAACATCAATAGTATGATGTCAAATGCTTCTGTTAAGGCTGGTTATTACAATGATGATTTGGTTTTTCAAGATCTTAATATTAAAGGTGGAAAAGCTATTCTAGTTTGGGTTGATTATGATTCTTTGGTGAATAATGTTAGTGTTACACTTTCTCCAACTTCTAACAAACCTAAAAAACCTACCTTGTCTTTTCATTTGGATCTTTCAATGGTTCTTCTTGATACTATGTATGTTGGTTTCTCTGCTTCTACTGGTTTACTTGCTAGCTCTCATTATCTTTTGGGTTGGAGTTTCAAAATCAATGGACCAGCACCTTTGCTTGATCTGTCTTCACTGCCACAGCTTCCACAGCCAAAGAAGAAACAAACTTCTTTGATAACCGGTGTTTCGGTTGCGGCTTCTGTTATTGTATTGGGTTCTATAGCCTTTGGTTTTTACCTTTTCAGAAAAATCAAGAATGCTGATGTTATAGAAGCATGGGAGCTTGAAGTTGGGCCTCATAGATACTCTTATCAAGAGCTTAAGAAAGCTACAAAAGGTTTCAAGGAGAAAGGGTTACTTGGGCAGGGTGGTTTTGGCAGAGTTTACAAAGGGACGTTGCCGAAATCGAAGATTCAAGTGGCTGTTAAGAGAGTTTCGCATGAGTCGAAACAAGGGTTGAGGGAATTTGTGTCGGAAATCGCGAGCATAGGCCGGCTTCGTCACCGGAATTTGGTTCAGTTACTCGGGTGGTGTCGTCGCAGAGGAGACCTTTTACTTGTGTACGATTTCATGGCGAATGGAAGCTTAGACAAGTACTTGTTTGAGGATTCAGAATTTGTGCTGAGTTGGGAACAAAGGTTTAAGATAATAAAGGGTGTTGCTTCAGGTCTTTTGTATCTTCATGAAGGGTATGAGCAAGTGGTAATACATAGAGATGTTAAAGCTAGTAACGTGCTGTTAGATTTTGAACTTAATGGAAGATTAGGTGATTTTGGTTTGGCAAGGTTGTATGAACATGGTGCTAATCCAGGTACAACAAGAGTGGTGGGAACATTAGGCTATTTAGCGCCGGAGTTGCCTAGAACGGGAAGAGCAACAACAAGCTCCGACGTTTTTGCATTTGGCGCGCTTTTGCTAGAGGTTGCTTGCGGAAGAAGGCCTATTGAACCAAAGGCAATACAGGAAGAATTAGTGTTGGTGGATTGGGTGTGGGAAAGGTTCAAAGAAGGAAGAGCACTTGAAGTAGTGGACCCTAAATTGAATGGTAATTTTATTGAAAGTGAGTTATTGATGGTATTGAAATTGGGATTGATATGTTCAAATGATGTTCCTACTATAAGGCCTAACATGAGGCAAGTTGTGAGCATTTTGGATGGAGAAGTTGAGTTACCAAATGAAATGAGAAAGCCAGGAGGTATTGATTCACAAGAGGGGTTTGATGAATTCTTGCATTCTCTTGGAACTACTTCATTTGATAAGACAAACTCAAGCTCCTATGTTGGAAATAGAGACATGAATACTAGTTTTATCTCTTTTGGTAATTCACCTTAA 2022 0.3956 MQLQTHLKLILSFSFLLFLPTLSQIDQLLYPGFKNTGPKNLTLNGISEIEKNGMIRLTNETSRLMGHAFYPSPFQLKNKTTGKVFSFSSSFALAVVPEYPKLGGHGMAFTIAPTKDLKALPSQYLGLLNSSDVGNFSNHLFAVEFDTVQDFEFGDINDNHVGININSMMSNASVKAGYYNDDLVFQDLNIKGGKAILVWVDYDSLVNNVSVTLSPTSNKPKKPTLSFHLDLSMVLLDTMYVGFSASTGLLASSHYLLGWSFKINGPAPLLDLSSLPQLPQPKKKQTSLITGVSVAASVIVLGSIAFGFYLFRKIKNADVIEAWELEVGPHRYSYQELKKATKGFKEKGLLGQGGFGRVYKGTLPKSKIQVAVKRVSHESKQGLREFVSEIASIGRLRHRNLVQLLGWCRRRGDLLLVYDFMANGSLDKYLFEDSEFVLSWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDFELNGRLGDFGLARLYEHGANPGTTRVVGTLGYLAPELPRTGRATTSSDVFAFGALLLEVACGRRPIEPKAIQEELVLVDWVWERFKEGRALEVVDPKLNGNFIESELLMVLKLGLICSNDVPTIRPNMRQVVSILDGEVELPNEMRKPGGIDSQEGFDEFLHSLGTTSFDKTNSSSYVGNRDMNTSFISFGNSP 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi98g00033 673 FunFam L-type lectin-domain containing receptor kinase S.4 421 627 - -
Vivi98g00033 673 FunFam L-type lectin-domain containing receptor kinase S.4 24 268 - -
Vivi98g00033 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Vivi98g00033 673 SMART serkin_6 344 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi98g00033 673 Gene3D Phosphorylase Kinase; domain 1 329 420 - -
Vivi98g00033 673 Gene3D Transferase(Phosphotransferase) domain 1 421 629 - -
Vivi98g00033 673 Pfam Legume lectin domain 28 275 IPR001220 GO:0030246
Vivi98g00033 673 PANTHER - 44 621 - -
Vivi98g00033 673 CDD STKc_IRAK 350 616 - -
Vivi98g00033 673 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 283 IPR013320 -
Vivi98g00033 673 FunFam Lectin-domain containing receptor kinase A4.3 329 420 - -
Vivi98g00033 673 Gene3D - 27 264 - -
Vivi98g00033 673 ProSitePatterns Protein kinases ATP-binding region signature. 350 373 IPR017441 GO:0005524
Vivi98g00033 673 SUPERFAMILY Protein kinase-like (PK-like) 326 620 IPR011009 -
Vivi98g00033 673 ProSiteProfiles Protein kinase domain profile. 344 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi98g00033 673 CDD lectin_legume_LecRK_Arcelin_ConA 30 265 IPR001220 GO:0030246
Vivi98g00033 673 Pfam Protein kinase domain 344 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi98g00033 23 667 Receptor kinase-like Gene Family AT3G55550 59.786 0.0 764
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vivi98g00033 Lectin_legB 2.8e-75 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi98g00033 - - gmx:100784346 1029.24