Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi98g00032 ATGTCTTTCAACCTTGTAGCAATAGTTTCTATGTTTGTAACATTAGTAGTAGTAGCAAGTGAAGGTAGCAATATTAGTTTCATCTATAATGGATTCAAATCATCAAATTTGTATCTTGATGGTGTTGCTGAATTAACCTCCAATGGATTACTTAGATTAACCAATGATTCCAAACAAGAAAAGGGTCATGCTTTCTATCCAAATCCTATAGTTTTCAACAATGGAATTAGTAGTCATGTGTTTTCTTTCTCTACTACTTTTGTTTTTGCTATAAGATCAGAGTTTGATTCTCTTAGTGGTCATGGAATTGTTTTTGTTGTTTCTCCAACAAAAGGGTTGCCGAATTCGTTACCAAGTCAGTACCTTGGTTTGTTCAATGAAACAAACATGGGAAACAACAACAGCCACGTTTTTGGTTTAGAGCTTGATACTATTTTGAATACTGAGTTTGATGATATCAATGACAACCATGTTGGAATTGATATCAATGGATTGAAATCGGAAAAATCGGCTTCGGCGGGATATTATGAGATAGGTGGCAATGAGTTCAAGAATTTGAGCCTTTTTAGTGGCTTACCAATGCAAGTTTGGTTGGAATATGATGGTGGAAAGAACAAGATTGATGTTACTTTAGCTCCAATTAATGTTGTTAAACCAGAAAAGCCTTTGTTATCATTGAACAAAGATTTGTCTTCTGTTATTAACAATAGTACTATGTATATTGGATTCTCATCTTCAACAGGTTCAATTCTAACCTCTCATTATGTTCTTGGTTGGAGTTTTAAGGTTAATGGTCAAGCTCAAAGCCTTGTGATTTCTCAACTTCCAAAGCTACCATCTTTAGAAGGAAAAAAGGATTCTAAGGTGATTTTCTCAATTGGGTTGCCTTTGATTTCACTATGCTTGTTTCTAATGGTAGCTATAGCAATGTTTCATTTCATCAAGAGGAAGAAAATGTTCTCTGAGCTTCATGAGGATTGGGAGAAAGACTATGGAACACAAAGATTCAAGTACAAAGATTTATACTTTGCAACAAAGGGTTTCAAGGAGAAGGAGCTATTAGGAACAGGTGGATTTGGCAGAGTCTACAAAGGTGTGATGCCAATTTCAAAGCTTGAGGTAGCTGTGAAGAGAGTGTCACATGAATCAAGACAAGGGATGAGGGAATTCGTGGCGGAGATCGTTAGTATCGGTCGCCTTCGTCATCGGAACCTTGTTCCGCTTCTCGGCTATTGCAGGCGAAAAGGCGAGTTACTTCTTGTCTATGATTACATGCAAAATGGAAGCTTGGACAAATATTTACATAACAGAAAACAAAGATTTACCTTAACTTGGAGTCAAAGGTTTAGGATCATCAAAGGTGTTGCTTCTGGTTTGTTTTATTTGCATGAAGAATGGGAACAGGTTGTTGTTCATAGAGATATTAAAGCTAGTAATGTTTTATTAGATGGTGAATTGAATGGAAGATTAGGTGATTTTGGTCTTTCAAGGCTATATGATCATGGAACTGATCCTCAAACAACACATGTTGTTGGAACACTTGGTTATCTAGCACCAGAGCATACAAGAACAGGTAAAGCCACAACAAGTTCTGATGTTTACTCTTTTGGTGCTTTTTTGCTTGAGGTTGTTTGTGGCAAAAGGCCTATAGAACAAGTAAGAGAATGTGAGAGTTTGATTTTGGTTGATTATGTATATGATTGTTGGAAAAGAGGTGAGATAGTTGAGGCTAGAGATGTAAATTTGGGATTGGATTATGTGGTTGAGGAAGTTGAATTGGTGTTGAAACTTGGTTTGTTGTGTTCACATTGTGAGGCATTGGCTAGGCCAAGTATGAGGCAGGTTTTGAGGTATTTGGAGAGGGATTTGGCACTGCCTGATTTGTCTTTTTTGAGTTTGTCTTCAATGGGAGTGACTAGTGGACAGTGTGAAAATTTTCAAGATTTTGGTATGTCTTATGCTTCTTCTTCTATGGATAGGCCATTCTCTCATACTTCTTCAATTGCTGAGTCACTTCTTTCTGGTGGTCGTTAG 2034 0.3697 MSFNLVAIVSMFVTLVVVASEGSNISFIYNGFKSSNLYLDGVAELTSNGLLRLTNDSKQEKGHAFYPNPIVFNNGISSHVFSFSTTFVFAIRSEFDSLSGHGIVFVVSPTKGLPNSLPSQYLGLFNETNMGNNNSHVFGLELDTILNTEFDDINDNHVGIDINGLKSEKSASAGYYEIGGNEFKNLSLFSGLPMQVWLEYDGGKNKIDVTLAPINVVKPEKPLLSLNKDLSSVINNSTMYIGFSSSTGSILTSHYVLGWSFKVNGQAQSLVISQLPKLPSLEGKKDSKVIFSIGLPLISLCLFLMVAIAMFHFIKRKKMFSELHEDWEKDYGTQRFKYKDLYFATKGFKEKELLGTGGFGRVYKGVMPISKLEVAVKRVSHESRQGMREFVAEIVSIGRLRHRNLVPLLGYCRRKGELLLVYDYMQNGSLDKYLHNRKQRFTLTWSQRFRIIKGVASGLFYLHEEWEQVVVHRDIKASNVLLDGELNGRLGDFGLSRLYDHGTDPQTTHVVGTLGYLAPEHTRTGKATTSSDVYSFGAFLLEVVCGKRPIEQVRECESLILVDYVYDCWKRGEIVEARDVNLGLDYVVEEVELVLKLGLLCSHCEALARPSMRQVLRYLERDLALPDLSFLSLSSMGVTSGQCENFQDFGMSYASSSMDRPFSHTSSIAESLLSGGR 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi98g00032 677 FunFam L-type lectin-domain containing receptor kinase S.4 425 631 - -
Vivi98g00032 677 Pfam Legume lectin domain 25 275 IPR001220 GO:0030246
Vivi98g00032 677 SMART serkin_6 348 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi98g00032 677 FunFam Lectin-domain containing receptor kinase A4.3 333 424 - -
Vivi98g00032 677 CDD lectin_legume_LecRK_Arcelin_ConA 25 265 IPR001220 GO:0030246
Vivi98g00032 677 Gene3D - 23 277 - -
Vivi98g00032 677 ProSiteProfiles Protein kinase domain profile. 348 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi98g00032 677 PANTHER - 32 623 - -
Vivi98g00032 677 CDD STKc_IRAK 354 621 - -
Vivi98g00032 677 Gene3D Transferase(Phosphotransferase) domain 1 425 631 - -
Vivi98g00032 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Vivi98g00032 677 SUPERFAMILY Protein kinase-like (PK-like) 330 630 IPR011009 -
Vivi98g00032 677 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 281 IPR013320 -
Vivi98g00032 677 FunFam L-type lectin-domain containing receptor kinase V.9 24 268 - -
Vivi98g00032 677 ProSitePatterns Protein kinases ATP-binding region signature. 354 377 IPR017441 GO:0005524
Vivi98g00032 677 Gene3D Phosphorylase Kinase; domain 1 333 424 - -
Vivi98g00032 677 Pfam Protein kinase domain 348 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi98g00032 20 677 Receptor kinase-like Gene Family AT2G37710 62.481 0.0 815
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vivi98g00032 Pkinase 1.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi98g00032 - - mtr:25498550 1218.37