Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi98g00029 ATGTTCCACAATCTTATGCTGGTGCTGTTTTTTCTGGCTACAGTTGTAGCAAGTAAAGATGTTAGTTTCATCTATAATGGATTCCAATCATCTCATTTGTATCTTGATGGTATTGCTAAGTTAACCTCCAATGGGTTACTCAGACTCACCAATGATACAACGGAACAAAAGGGACACGCTTTCTATCAAAATCCTATAGTTTTCAAGAATACTTCCAATGGAAGTGTGTCTTCTTTCTCAACTACTTTTGTATTTGCCATAAGACATGATATTCCAACTCTTAGTGGTCATGGAATTGTTTTTGTTGTTTCACCAACAAAAGGGTTACCATATTCACTACCAAGCCAGTACCTTGGTCTATTTAATAAATCCAACAACGGAAAGAGTAGCAACCATGTTTTTGGAGTGGAACTTGATACTATTGTAAACAGTGAGTTTAATGATATCAATGATAACCATGTTGGTATTGATATCAACGATTTAAGTTCAGTTAGTTCAACTCCTGCAGGATATTATGATAATAATGGTCAGTGGAAGAATTTGACCCTTTTCAGTGGCTATCCTATGCAGGTTTGGATTGAATATGATGGTGAAAAGAAGAAGATTGATGTTACTTTAGCTCCTATTAGTGTTGCTAAACCAAAACAACCTTTGTTGTCATTTGTCAAAGATCTTTCTCCAATTCTTCACAATAGTATGTATGTTGGGTTTTTATCAGCTACTGGCACAGTTCAAACTTCTCATTATATTCTTGGTTGGAGTTTTAAGGTTAATGGTCAAGCTCAAAGCCTTGTGATTTCTGAACTTCCTAAGCTACCAAGACTTGGTGATAGAAGAATATCCAAACTTTTAACTGTTGGGTTACCTTTGATTTTGCTAAGTTTGGTTTTCATGATAAGTTTAGGGGTTATTTATTTCATCAAAAGAAAGAATAAGTTTGCTGAATTGCTTGAAGATTGGGAGCATGAATACGGCCCTCGTAGGTTTAAATTCAAAGATTTGTACTTTGCCACAAAGGGTTTCAAGGAAAAAGAATTATTGGGAGTTGGTGGATTTGGCAGAGTCTACAAAGGTGTGATGCCAGGTTCCAAACTTGAGGTTGCTGTGAAGAGGGTTTCTCACGAATCGAGACAAGGTATGAAGGAGTTTGTGGCGGAAATTGTTAGTATCGGTCGTCTTCGTCATAGAAATCTTGTTCCACTTCTTGGTTATTGCAGGCGAAAAGGTGAGTTACTTCTGGTCTACGATTACATGTCTAATGGAAGTTTAGACAACTATTTATACAACCAACCTAATGTGAGCTTGAATTGGAGTCAAAGATATAGAATCATCAAAGGTGTTGCTTCAGGTTTGTTTTATCTTCATGAAGAATGGGAGCAAGTTGTGATTCATAGAGACATAAAAGCTAGTAATGTGTTATTAGATGGTGAAATGAATGGTAGATTGGGAGATTTTGGTCTTGCAAGGTTGTATGATCATGGTGCTGACCCACACACAACTCATTTGGTTGGAACTGTAGGGTATCTAGCTCCTGAGCATACTAGAACAGGTAAAGCCACTAAGTTTTCTGATGTGTTTTCTTTTGGTGCTTTTGTTCTAGAGGTTGTTTGTGGCAAGAGGCCTATCTATCATATAGGGGGAAATGAGAGTGTAATTTTGGTTGATTCTGTTTTTGAGTATTGGAAAAGAGGTGAGATTCTTGAGGCAAAAGATGTAAATTTGGGAACATATTATGTGTTTGAAGAGGTTGAGTTGGTGTTGAAACTTGGCTTGTTGTGTTCACATTCAGAACCTTTGGCTAGACCAAATATGAGGCAAGTTGTGCAGTATTTGGAGATGGATATACCATTGCCTGATTTGTCTTTGCTTAGTTTATCTTCTTCTGGATTAACTTTTAGGTACCAAGAGTGTTTTGAGGACATTCCAATGTCTTATCCATCTTCAATGGACAAGACTATGTCACATACTTCTGTGTCAATTTCTGAGTCACTTCTTTCGGGTGGTCGCTGA 2010 0.3721 MFHNLMLVLFFLATVVASKDVSFIYNGFQSSHLYLDGIAKLTSNGLLRLTNDTTEQKGHAFYQNPIVFKNTSNGSVSSFSTTFVFAIRHDIPTLSGHGIVFVVSPTKGLPYSLPSQYLGLFNKSNNGKSSNHVFGVELDTIVNSEFNDINDNHVGIDINDLSSVSSTPAGYYDNNGQWKNLTLFSGYPMQVWIEYDGEKKKIDVTLAPISVAKPKQPLLSFVKDLSPILHNSMYVGFLSATGTVQTSHYILGWSFKVNGQAQSLVISELPKLPRLGDRRISKLLTVGLPLILLSLVFMISLGVIYFIKRKNKFAELLEDWEHEYGPRRFKFKDLYFATKGFKEKELLGVGGFGRVYKGVMPGSKLEVAVKRVSHESRQGMKEFVAEIVSIGRLRHRNLVPLLGYCRRKGELLLVYDYMSNGSLDNYLYNQPNVSLNWSQRYRIIKGVASGLFYLHEEWEQVVIHRDIKASNVLLDGEMNGRLGDFGLARLYDHGADPHTTHLVGTVGYLAPEHTRTGKATKFSDVFSFGAFVLEVVCGKRPIYHIGGNESVILVDSVFEYWKRGEILEAKDVNLGTYYVFEEVELVLKLGLLCSHSEPLARPNMRQVVQYLEMDIPLPDLSLLSLSSSGLTFRYQECFEDIPMSYPSSMDKTMSHTSVSISESLLSGGR 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi98g00029 669 Pfam Legume lectin domain 21 269 IPR001220 GO:0030246
Vivi98g00029 669 FunFam L-type lectin-domain containing receptor kinase V.9 20 262 - -
Vivi98g00029 669 FunFam L-type lectin-domain containing receptor kinase S.4 418 624 - -
Vivi98g00029 669 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 276 IPR013320 -
Vivi98g00029 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Vivi98g00029 669 CDD lectin_legume_LecRK_Arcelin_ConA 21 259 IPR001220 GO:0030246
Vivi98g00029 669 FunFam L-type lectin-domain containing receptor kinase V.9 326 417 - -
Vivi98g00029 669 CDD STKc_IRAK 347 612 - -
Vivi98g00029 669 ProSitePatterns Protein kinases ATP-binding region signature. 347 370 IPR017441 GO:0005524
Vivi98g00029 669 Gene3D Phosphorylase Kinase; domain 1 326 417 - -
Vivi98g00029 669 PANTHER - 16 615 - -
Vivi98g00029 669 Pfam Protein kinase domain 341 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi98g00029 669 Gene3D Transferase(Phosphotransferase) domain 1 418 615 - -
Vivi98g00029 669 SMART serkin_6 341 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi98g00029 669 Gene3D - 19 269 - -
Vivi98g00029 669 ProSiteProfiles Protein kinase domain profile. 341 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi98g00029 669 SUPERFAMILY Protein kinase-like (PK-like) 322 625 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi98g00029 17 669 Receptor kinase-like Gene Family AT2G37710 65.244 0.0 861
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vivi98g00029 Pkinase 7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi98g00029 - - mtr:25498550 976.852