Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi98g00028 ATGTCTCACACTCTCAGCCTTATATTGGTGTTGTTTTTTCTGGTTACAGTTGTAGCAAGTAAAGATGTTAGTTTCATCTATAACAATGGATTCCAATCATCTCATTTGTATCTTGATGGTATTGCTGAGTTAACCTCTAATGGCATACTCAGACTCACCAATGAAACCAAACAAGAAAAAGCACATGCTTTCTATCCAAATCCTATACTTTTCAAAAACACTTCCAATGGAAGTGTTTCTTCTTTCTCAACCACTTTTGTGTTTGCCATAAGACCTCAGTATGCAACTCTTAGTGGTCATGGAATTGTTTTTGTTGTTTCTCCAACAAAAGGGTTACCATATTCACTACAAAGCCAGTACCTTGGTCTATTTAATAAATCCAACAATGGAAACAGTAGCAACCATGTTTTCGGGGTGGAACTTGATACTATTCAAAGCAGTGAGTTTAATGATATCAATGATAACCATGTTGGTATTGACATCAATGATTTGAAATCAGCTAATTCAACTCCTGCAGGATATTATGATAGTAATGGTCAGAAGAAGAATTTGACTCTTTTCAGTGGCTATCCTATGCAGGTTTGGGTTGAATATGATGGTGAAAAGAAGAAGATTGATGTTACTTTAGCTCCTACTGATGTTGTTAAACCAAAACAACCTTTGTTGTCATTTACCAAAGATCTTTCTCCGATTCTTAACAATAGTATGTATGTTGGATTTTCATCAGCTACTGGATCAGTTTTTACTTCTCATTATATTCTTGGTTGGAGTTTTAAGGTTAATGGTCAAGCTCAAAGCCTTGTGATTTCTGAACTTCCTAAGTTACCAAGATTTGGTGAGAAAAAACAATCCAAGTTTTTAACTGTTGGGTTACCTTTGCTTTTGTTAAGTTTGGTTTTCATGATAACTTTAGGAGTTATTTATTATATAAAAAGGAGGAAGAAATTTGCTGAGTTGCTTGAAGATTGGGAACATGAATATGGTCCACATAGGTTTAAGTTCAAAGATTTATACTATGCTACAAAGGGTTTCAGGGAGAAGGGGCTATTGGGTGTCGGTGGATTTGGTAGAGTCTACAAAGGTGTGATGCCAGGTTCCAAACTTGAGGTTGCTGTGAAGAGGGTGTCTCATGAATCAAGACAAGGGATGAGGGAATTTGTGGCGGAGATTGTTAGTATCGGTCGTCTTCGTCACAGGAATCTCGTTCCGCTTCTCGGCTATTGCAGGCGAAAAGGTGAGTTACTTCTTGTCTATGATTACATGTCTAATGGAAGCTTAGACCACTATCTGCACAACCAACCAAGAGTGAGCTTGAATTGGAGTCAAAGATTTAGAATCATCAAAGGGGTTGCTTCGGGTTTGTTTTATCTGCACGAAGGATGGGAGCAAGTTGTGATTCATAGAGACATAAAAGCTAGTAATGTTTTATTAGATGGTGAAATGAATGGTAGGTTGGGAGATTTTGGTCTTGCAAGGTTGTATGATCATGGTGCTGATCCTCACACAACTCATCTGGTTGGAACTGTTGGGTATCTTGCTCCTGAGCATACCAGAACAGGTAAAGCAACTAAATTTTCTGATGTGTTTGCTTTTGGTGCATTTCTTCTTGAAGTTGTTTGTGGCAGGAGGCCTATAGATCATGTAGGAGAAAATGAGAGTGTGATTCTGGTTGATTATGTGTTTGAATGTTGGAAAAGAGGTGATATTCTTGAGGCAAAAGATGTAAATTTGGGAATATATTATGTGTCTGAGGAGGTTGAGTTGGTGTTGAAACTTGGTTTGATGTGTTCACATTCAGAACCTGGGGCTAGACCAAGCATGAAACAGGTTGTTCAGTATTTGGAGATGGATATACCATTGCCTGATTTGTCCTTGCTTAGTTTATCTTCTTCTGGATTAACTTTTGGGTACCAAGAACATTTTGAGGACTTTCCAATGTCTTATCCATCTTCTATGGACAAGACAATGTCGCATACTTCTATGTCTATTGCTGAATCGCATCTCTCCGGTGGTCGTTGA 2019 0.3809 MSHTLSLILVLFFLVTVVASKDVSFIYNNGFQSSHLYLDGIAELTSNGILRLTNETKQEKAHAFYPNPILFKNTSNGSVSSFSTTFVFAIRPQYATLSGHGIVFVVSPTKGLPYSLQSQYLGLFNKSNNGNSSNHVFGVELDTIQSSEFNDINDNHVGIDINDLKSANSTPAGYYDSNGQKKNLTLFSGYPMQVWVEYDGEKKKIDVTLAPTDVVKPKQPLLSFTKDLSPILNNSMYVGFSSATGSVFTSHYILGWSFKVNGQAQSLVISELPKLPRFGEKKQSKFLTVGLPLLLLSLVFMITLGVIYYIKRRKKFAELLEDWEHEYGPHRFKFKDLYYATKGFREKGLLGVGGFGRVYKGVMPGSKLEVAVKRVSHESRQGMREFVAEIVSIGRLRHRNLVPLLGYCRRKGELLLVYDYMSNGSLDHYLHNQPRVSLNWSQRFRIIKGVASGLFYLHEGWEQVVIHRDIKASNVLLDGEMNGRLGDFGLARLYDHGADPHTTHLVGTVGYLAPEHTRTGKATKFSDVFAFGAFLLEVVCGRRPIDHVGENESVILVDYVFECWKRGDILEAKDVNLGIYYVSEEVELVLKLGLMCSHSEPGARPSMKQVVQYLEMDIPLPDLSLLSLSSSGLTFGYQEHFEDFPMSYPSSMDKTMSHTSMSIAESHLSGGR 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi98g00028 672 FunFam Lectin-domain containing receptor kinase A4.3 329 420 - -
Vivi98g00028 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Vivi98g00028 672 Gene3D Transferase(Phosphotransferase) domain 1 421 618 - -
Vivi98g00028 672 Gene3D Phosphorylase Kinase; domain 1 329 420 - -
Vivi98g00028 672 FunFam L-type lectin-domain containing receptor kinase V.9 22 265 - -
Vivi98g00028 672 Pfam Legume lectin domain 23 272 IPR001220 GO:0030246
Vivi98g00028 672 CDD lectin_legume_LecRK_Arcelin_ConA 23 262 IPR001220 GO:0030246
Vivi98g00028 672 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 280 IPR013320 -
Vivi98g00028 672 ProSitePatterns Protein kinases ATP-binding region signature. 350 373 IPR017441 GO:0005524
Vivi98g00028 672 FunFam L-type lectin-domain containing receptor kinase S.4 421 627 - -
Vivi98g00028 672 Gene3D - 21 272 - -
Vivi98g00028 672 SUPERFAMILY Protein kinase-like (PK-like) 319 616 IPR011009 -
Vivi98g00028 672 SMART serkin_6 344 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi98g00028 672 PANTHER - 17 618 - -
Vivi98g00028 672 Pfam Protein kinase domain 345 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi98g00028 672 ProSiteProfiles Protein kinase domain profile. 344 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi98g00028 672 CDD STKc_IRAK 350 615 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi98g00028 19 672 Receptor kinase-like Gene Family AT2G37710 66.616 0.0 882
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vivi98g00028 Pkinase 2.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi98g00028 - - mtr:25498550 982.245