Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi98g00015 ATGCCAAGAGGCAAAATGAAGTTTGACGAGGATCTTGGTCCTGACCGTGAAGATGATTTTCAAACAGATGATGAAGAAAATCAAGCAGAAAGGGTTTTTGATAATTTGGATGATGATGATACCGAATCAGATATTAATAATAATTCTCCTCCTTCAAGAAATTTATCCAATGAGGTTGACTTCAATACCTCTTGGCCTCAAACCTATAGGACATCTATGGACATGTTAACAAGTGTAAGTAAGACACCACCTGGGATTAATTTCTTCAAGATAATTAGTTCAGCAGGGAAGATTATTGTCCCTAAGGAATGCGTCCAAGATGAATTTACCAATTCTTTGACTTTACCGCTTGTTTCTGACGAAAAAACTTCAATCGGAAAAGAGGAACCTATATCGAAACCTCAAGTTCAATCACATGTCAGCTGTCCGAAAATTTCTGCCACTGAGTTTTCGCCACCAGAGAGGGAAAGTTCCTTTGCACAATCAGTGATTAATGGGACCAATATATTATGTGGTATCGGGCTTATGACCATTCCGTATGCTGTAAAAGAAGGAGGGTGGTTGAGCCTTGCAATACTGCTACTGTTTGCTCTCGCTTGTTGCTATACTGGAATTTTATTGATGAGATGTTTACAAAGCCGTCCTCAACTCAACACCTATCCAGATATTGGCCAGGCTGCTTTTGGAATTGCTGGTCGCTTGGGGATTGCGATCATTTTATACATGGAACTATTTGGTTCTTGTGTTGAGTATATAACACTTGTCAGTGATAACCTCTCGTCACTTTTCCCCAACACCGGCATGAACTTAGCTGGTACAGAGCTAAGTACAAATCAAGTTTTTTCCATCACTGCAGCTCTTCTAGTTTTACCGACAGTTTGGTTGCGAGATTTAAGCCTGCTTTCATATATTTCAGTTGGAGGAATATTTGCAACAACACTTGTAGCACTTTGCTTGTTTTGGGCTGGTGCAGTAAACCAAATTGGATTTATCAATCCAAGAACGAAAATTTTAGACATTGAAAACATATCTGTATCAATTGGTCTCTTTGGTTTCGGATTTGCTGGCCATGCTGTTTTTCCAAATGTCTACTCTTCCATGAAGGATCAATCCAAATTCCCATTAGTTCTATATATCAGTTTTGTTTTCTGTCTTGTTATGTACGTTAGTGTAGGAGTAGTCGGATATTTACTGTTTGGTGACAAAGTTGAATCTCAGTTTACCTTAAACATGCCAAAAGAGTTATATGCATCAAAGATAGCAATCTGGACAACGGTTGTGACTCCTCTAGCAAAATACGCCTTAACATTGTTGCCTATTGTATCAAGCATAGAGGAACTTGTTCCTTTTCCTAGGCTAAGATGTTATGCTATGTCTATTGTTATCAGAACAGCTTTAGTTCTTGCAAGTTTAGCTGTGGCTCTCTCTTTTCCATATTTTGGTTCTGTAATGGCACTAATTGGTTCTATGTTGTCAATGATAGTTGCACTTATTTATCCTTGTGCATGTTATCTCAAGCTACACAGTGGCAGATTATCAAATATGCAGATAACAAATTGCATTTTGGTTATTATTGTGGGGGTGATAAGCGGTATCATAGGAACATACTCAGCTACTACAAGAATAGCTGGCAAGGGAGACTAA 1644 0.385 MPRGKMKFDEDLGPDREDDFQTDDEENQAERVFDNLDDDDTESDINNNSPPSRNLSNEVDFNTSWPQTYRTSMDMLTSVSKTPPGINFFKIISSAGKIIVPKECVQDEFTNSLTLPLVSDEKTSIGKEEPISKPQVQSHVSCPKISATEFSPPERESSFAQSVINGTNILCGIGLMTIPYAVKEGGWLSLAILLLFALACCYTGILLMRCLQSRPQLNTYPDIGQAAFGIAGRLGIAIILYMELFGSCVEYITLVSDNLSSLFPNTGMNLAGTELSTNQVFSITAALLVLPTVWLRDLSLLSYISVGGIFATTLVALCLFWAGAVNQIGFINPRTKILDIENISVSIGLFGFGFAGHAVFPNVYSSMKDQSKFPLVLYISFVFCLVMYVSVGVVGYLLFGDKVESQFTLNMPKELYASKIAIWTTVVTPLAKYALTLLPIVSSIEELVPFPRLRCYAMSIVIRTALVLASLAVALSFPYFGSVMALIGSMLSMIVALIYPCACYLKLHSGRLSNMQITNCILVIIVGVISGIIGTYSATTRIAGKGD 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi98g00015 547 MobiDBLite consensus disorder prediction 45 60 - -
Vivi98g00015 547 MobiDBLite consensus disorder prediction 1 60 - -
Vivi98g00015 547 Pfam Transmembrane amino acid transporter protein 156 536 IPR013057 -
Vivi98g00015 547 MobiDBLite consensus disorder prediction 15 44 - -
Vivi98g00015 547 FunFam Amino acid transporter AVT1A 155 545 - -
Vivi98g00015 547 PANTHER OS05G0424000 PROTEIN-RELATED 162 528 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi98g00015 6 545 Amino Acid or Auxin Permease AAAP Family AT5G02180 51.537 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi98g00015 K15015 - qsa:O6P43_016746 590.882