Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi98g00004 ATGGTTGAGTCATCCATGTCAAACACAATGATGATGGAGAAAGTCATGACTTCTAATTGGTCAGAAGATGATGAACTCTTAAGAGAGCTTTTAGATGATGAAACTCCTCTTTTCATGTTGCCACAAGAGAGAGTAACTGAAGTAACCAACAATACAAGTTATGATTCTTCAAAAGACCAACCTTTTAATAGGTTCATTTCAAATATTTATTCAGGTCCTACCATTTCAGATATTGAAAATGCTTTGTTAGTTACTAACCATAGAGAGAATTTTCCACAAATTTCATCAAGAGTTTCTATATTGGAAAGAAGTTTGAGTAAGATTGAGAATAAGTATACTTTGAAAATCAAATGCTTTGGAAATGGAATGGGTGATGATGGATATAGGTGGAGGAAGTATGGTCAAAAATCCATTAAAAATAGCCCAAATCCTAGGAGTTACTATAGGTGCACCAACCCAAGATGTGGTGCTAAGAAGCAAGTTGAAAGATCTAATGAAGACCCTGATACTCTTATAATCACTTATGAAGGGCTCCACTTGCACTTTACTTATCCTTATTTCCTTGTGGGCCAATCACATCAATCAAGTTCTCATCCACCAATCAAGAAGCCAAAGCCAACTTCTTCACAAGGCCCAACACAAGCCCATAAAGGAAATGATGTTCATGAGGGCCAGAATATACAAGAAGCCCATGAAGCCCAAGCTAGTGCTTCTTTGGAACTCATATCACCCACTTTATTGGACTCTACACAAGATTTGGCCCAAGAAAATTTGGGCTCACAAGGGTTGCTTGAAGATATGGTGCCATTCATGGTTAGGAACCCTACAAATAATGTTGATAGTGATGATTACTCAGAATTTTCCTTTTCCTCACAATATTCTCCTACAACGTTATGGACTTCTGATTTTTCCACTTCTACCTCTTGTTATGCTGTTGGCTTAAATCACAGTGTTTAG 957 0.373 MVESSMSNTMMMEKVMTSNWSEDDELLRELLDDETPLFMLPQERVTEVTNNTSYDSSKDQPFNRFISNIYSGPTISDIENALLVTNHRENFPQISSRVSILERSLSKIENKYTLKIKCFGNGMGDDGYRWRKYGQKSIKNSPNPRSYYRCTNPRCGAKKQVERSNEDPDTLIITYEGLHLHFTYPYFLVGQSHQSSSHPPIKKPKPTSSQGPTQAHKGNDVHEGQNIQEAHEAQASASLELISPTLLDSTQDLAQENLGSQGLLEDMVPFMVRNPTNNVDSDDYSEFSFSSQYSPTTLWTSDFSTSTSCYAVGLNHSV 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi98g00004 318 SMART WRKY_cls 124 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi98g00004 318 ProSiteProfiles WRKY domain profile. 119 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi98g00004 318 MobiDBLite consensus disorder prediction 193 220 - -
Vivi98g00004 318 FunFam WRKY transcription factor 110 185 - -
Vivi98g00004 318 Gene3D WRKY domain 120 177 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi98g00004 318 Pfam WRKY DNA -binding domain 125 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi98g00004 318 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 64 216 IPR044810 GO:0003700
Vivi98g00004 318 SUPERFAMILY WRKY DNA-binding domain 122 181 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi98g00004 34 276 WRKY Transcription Factor Family AT5G43290 45.594 6.76e-52 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi98g00004 WRKY 9.2e-26 CL0274