LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi98g00004	ATGGTTGAGTCATCCATGTCAAACACAATGATGATGGAGAAAGTCATGACTTCTAATTGGTCAGAAGATGATGAACTCTTAAGAGAGCTTTTAGATGATGAAACTCCTCTTTTCATGTTGCCACAAGAGAGAGTAACTGAAGTAACCAACAATACAAGTTATGATTCTTCAAAAGACCAACCTTTTAATAGGTTCATTTCAAATATTTATTCAGGTCCTACCATTTCAGATATTGAAAATGCTTTGTTAGTTACTAACCATAGAGAGAATTTTCCACAAATTTCATCAAGAGTTTCTATATTGGAAAGAAGTTTGAGTAAGATTGAGAATAAGTATACTTTGAAAATCAAATGCTTTGGAAATGGAATGGGTGATGATGGATATAGGTGGAGGAAGTATGGTCAAAAATCCATTAAAAATAGCCCAAATCCTAGGAGTTACTATAGGTGCACCAACCCAAGATGTGGTGCTAAGAAGCAAGTTGAAAGATCTAATGAAGACCCTGATACTCTTATAATCACTTATGAAGGGCTCCACTTGCACTTTACTTATCCTTATTTCCTTGTGGGCCAATCACATCAATCAAGTTCTCATCCACCAATCAAGAAGCCAAAGCCAACTTCTTCACAAGGCCCAACACAAGCCCATAAAGGAAATGATGTTCATGAGGGCCAGAATATACAAGAAGCCCATGAAGCCCAAGCTAGTGCTTCTTTGGAACTCATATCACCCACTTTATTGGACTCTACACAAGATTTGGCCCAAGAAAATTTGGGCTCACAAGGGTTGCTTGAAGATATGGTGCCATTCATGGTTAGGAACCCTACAAATAATGTTGATAGTGATGATTACTCAGAATTTTCCTTTTCCTCACAATATTCTCCTACAACGTTATGGACTTCTGATTTTTCCACTTCTACCTCTTGTTATGCTGTTGGCTTAAATCACAGTGTTTAG	957	0.373	MVESSMSNTMMMEKVMTSNWSEDDELLRELLDDETPLFMLPQERVTEVTNNTSYDSSKDQPFNRFISNIYSGPTISDIENALLVTNHRENFPQISSRVSILERSLSKIENKYTLKIKCFGNGMGDDGYRWRKYGQKSIKNSPNPRSYYRCTNPRCGAKKQVERSNEDPDTLIITYEGLHLHFTYPYFLVGQSHQSSSHPPIKKPKPTSSQGPTQAHKGNDVHEGQNIQEAHEAQASASLELISPTLLDSTQDLAQENLGSQGLLEDMVPFMVRNPTNNVDSDDYSEFSFSSQYSPTTLWTSDFSTSTSCYAVGLNHSV	318

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi98g00004	318	SMART	WRKY_cls	124	183	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Vivi98g00004	318	ProSiteProfiles	WRKY domain profile.	119	181	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Vivi98g00004	318	MobiDBLite	consensus disorder prediction	193	220	-	-
	Vivi98g00004	318	FunFam	WRKY transcription factor	110	185	-	-
	Vivi98g00004	318	Gene3D	WRKY domain	120	177	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Vivi98g00004	318	Pfam	WRKY DNA -binding domain	125	181	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Vivi98g00004	318	PANTHER	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	64	216	IPR044810	GO:0003700
	Vivi98g00004	318	SUPERFAMILY	WRKY DNA-binding domain	122	181	IPR036576	GO:0003700\|GO:0006355\|GO:0043565

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi98g00004	34	276	WRKY Transcription Factor Family	AT5G43290	45.594	6.76e-52	171

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Vivi98g00004		WRKY	9.2e-26	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi98g00004	-		-	tpra:123889134	421.394