Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi98g00001 ATGATGGATCCACATCTCAATGGGTTTTGTGGTTCCACAAATGAGATCCGGTTTGGGAATCAATCTTATCCAGTTATTCAGAATCAGAGATTTGAATTTGGTTCCAATTTGGTATCGGCTGATTGTACGCCATCTTCGACAATAACATCGGTTTCGACGCACGAGGAACCGTCTCCTGAGGACTGTGAGTTTTCTGATGCTGTTTTGAATTACATTAATAACATACTTATGGAAGAAGATATGGAAGATAAGACATGTATGTTGCAAGATTCTTTAGATCTTCAGATTGCTGAGAAATCGTTCTATGAAGTAATAGGCGAAAAGTACCCGGATTCGGTTTCGGTTTCGCCATTAGGACAACTTACAAGTGTTTGTAATCAAAATGAGTGTGTTGGAGATAGTAACTTCTTTGATGATTATGGTACTTGTGTTGATGATGGTGATCTTAGTTGCATTTTTACAAAGAATTCTTTTCGTGGAAACTCGAGAGAAGTTCATTTTCCTCAACCAGATTTTCAAGGAAATAGTGTTTCACAATCATCTCATAGCTCTACAAATAGCGTAAAAAGTACTGTGGAAGGGCTTTTGGATTCTCCGGATAGTATTTTACATGTTTCTGATCAGAATAGCGGTAGTCAACCGATATTGCAATTTCAAAAGGGCGTTGAGGAGGCTAATAAGTTTCTCCCTAGTGGAAATGGCCTCTTTCAAAATTTCGATGTTGCTAAGTTTTCGATACTAGAGTCTGAAGTGGCGAAAGATGAATTATCAGTTAAGGTGGAGAAGGGTGAGCGAGACTCATTTCTTTCTAAGGGAAGGAAGCATCATTACGACGATGAGGGAGGCGTCGAAGAAAATAGAAGCAACAAGCAAGCGGCGATTTACTCGGATCCTATGTTGAGGTCAAATCTGGCCGATGCGATCCTGCTTCATAGTTTAGGAGATGGTAAGAAGCATTTTACGGCTCGTCGTGAAGCATTGCAAACTAAGAACAATATGGTGCCAAGTAATAAATCGAAAGCCCGTACTAGTGGAAAAGGACGAGGTAAAGGTAAAAAACAAAACGGAAAAAAGGAAGTGATTGATTTGAGAACACTGCTTGTTATTTGTGCACAGGCTGTTGCAGCAGACGACCATAAAAGTGCGCACGAATTGCTGAAGCAGATCAGGCAGCACTCGAACCCTTTCGGAGATGGAAATCAGCGGTTGGCTAATATATTTGCCGATGGCCTTGAGGCACGTTTGGCTGGTACTGGAAGCCAGATTTATAAAGGACTAATCAGTAAAAGAACATCGGCTGCCAATTATCTGAAAGCTTATCATCTATACCTTGCTGCTTGCCCTTTTCGAAAGATGACTAGTTTCGTCTCAAATGTTACTATAATGAACTCTGCGGAAAATTCAATGAGGGTCCATATTGTAGATTTCGGCATTCTCTATGGTTTCCAATGGCCTACCTTAATACAAAGACTTTCGTTACGGCCTGGAGGACCACCAAAGCTTCGGATTACAGGAATAGACTTTCCACAACCCGGTTTCAGGCCTGCAGAGAGAATTATAGAGACCGGTTCGCGCTTGGCAGCATATGCTGAAACTTTTAAAGTGCCGTTTGAGTATAATGCCATAGCGAAAAAGTGGGAGACCATTCAGCTTGAGGAACTCAAGATCGACAAAGACGAATACCTTGTTGTTACCTGTTTTTATCGCGGTAAAAACTTGCTGGATGAATCCGTCGTAGTAGACAGTCCGAGGAACAAATTCCTCAATTTGATAAGGAGGATCAAGCCTGATATATTCATTCATGGCATTACGAACGGAGCCTTTAATGCGCCTTTCTTTGTGACTCGGTTTAGAGAGGCGTTGTTTCACTTCTCTTCACTTTTCGATATGCTTGAGAGTATTGTTCCTCGCGAAGATTGGGAAAGGATGCTAATTGAGAAAGAAATATTCGGGAAGGAAGCATTGAATGTTACAGCTTGTGAAGGTTGTGAGAGAGTAGAGAGACCAGAGACATATAGGCAGTGGCAAGTTCGTATTCTCCGAGCCGGGTTTTCACAACAGTCTTTCGGAAAAAAGACGGTGGAAAGGGCAGTGGAGAAAGTAAGAACTAGCTACCACAAAGATTTTGTAATCGACGAAGATAGCAAGTGGTTATTGCAAGGTTGGAAAGGGCGAATCGTGTTCGCGCTTTCTTGTTGGAAACCTGCTTGA 2211 0.4175 MMDPHLNGFCGSTNEIRFGNQSYPVIQNQRFEFGSNLVSADCTPSSTITSVSTHEEPSPEDCEFSDAVLNYINNILMEEDMEDKTCMLQDSLDLQIAEKSFYEVIGEKYPDSVSVSPLGQLTSVCNQNECVGDSNFFDDYGTCVDDGDLSCIFTKNSFRGNSREVHFPQPDFQGNSVSQSSHSSTNSVKSTVEGLLDSPDSILHVSDQNSGSQPILQFQKGVEEANKFLPSGNGLFQNFDVAKFSILESEVAKDELSVKVEKGERDSFLSKGRKHHYDDEGGVEENRSNKQAAIYSDPMLRSNLADAILLHSLGDGKKHFTARREALQTKNNMVPSNKSKARTSGKGRGKGKKQNGKKEVIDLRTLLVICAQAVAADDHKSAHELLKQIRQHSNPFGDGNQRLANIFADGLEARLAGTGSQIYKGLISKRTSAANYLKAYHLYLAACPFRKMTSFVSNVTIMNSAENSMRVHIVDFGILYGFQWPTLIQRLSLRPGGPPKLRITGIDFPQPGFRPAERIIETGSRLAAYAETFKVPFEYNAIAKKWETIQLEELKIDKDEYLVVTCFYRGKNLLDESVVVDSPRNKFLNLIRRIKPDIFIHGITNGAFNAPFFVTRFREALFHFSSLFDMLESIVPREDWERMLIEKEIFGKEALNVTACEGCERVERPETYRQWQVRILRAGFSQQSFGKKTVERAVEKVRTSYHKDFVIDEDSKWLLQGWKGRIVFALSCWKPA 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi98g00001 736 ProSiteProfiles GRAS family profile. 354 734 IPR005202 -
Vivi98g00001 736 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 287 724 IPR005202 -
Vivi98g00001 736 MobiDBLite consensus disorder prediction 330 356 - -
Vivi98g00001 736 Pfam GRAS domain family 363 734 IPR005202 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi98g00001 36 735 GRAS Transcription Factor Family AT2G37650 52.374 0.0 660
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vivi98g00001 GRAS 4.9e-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi98g00001 - - gmx:100801824 1061.21