Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi985g00005 | ATGGCTTCTTCATCATCTTCTTCTGCGAACCGTGAAGGACACTACAGAGGTGTTAGAAAGCGACCATGGGGACGCTACGCTGCTGAGATTCGTGATCCCTGGAAGAAGACACGAGTTTGGCTGGGTACATTTGATACTCCTGAGGAAGCTGCACTTGCTTACGACGGCGCTGCTCGTTCTCTCCGTGGAGCTAAAGCTAAAACAAACTTCCCTCCGGCTCCGGTCCCCGGCGGGCTTTGTCTCGACCTCAACGCTCCTTCTACTGGCCTAACCACTTGGCCACCAGTTCCGTCACGCAGCTTGGTTCTCACTGAGTTTCTCCAAACCAGTGTTCTCAAGGATTTTAACCCTCCTCAGCCTCCTCCCATCGCCGCCGTCAGTGGACAGAGACGTAATGACGCTGCTCTTCCGGTTTCCGCCAGAGTTCAGATGGTTGAGAACTCACCAACAGCGGCTTACTTGGGACTTGTCCGACGTGGGATCCCGATTGACCTCAACGAACCTCCACCGTTGTGGCTTTGA | 522 | 0.5441 | MASSSSSSANREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGAKAKTNFPPAPVPGGLCLDLNAPSTGLTTWPPVPSRSLVLTEFLQTSVLKDFNPPQPPPIAAVSGQRRNDAALPVSARVQMVENSPTAAYLGLVRRGIPIDLNEPPPLWL | 173 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi985g00005 | 173 | ProSiteProfiles | AP2/ERF domain profile. | 14 | 71 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi985g00005 | 173 | Gene3D | AP2/ERF domain | 14 | 72 | IPR036955 | GO:0003700|GO:0006355 | |
Vivi985g00005 | 173 | CDD | AP2 | 14 | 73 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi985g00005 | 173 | PANTHER | AP2 DOMAIN CLASS TRANSCRIPTION FACTOR | 8 | 119 | - | - | |
Vivi985g00005 | 173 | SMART | rav1_2 | 14 | 77 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi985g00005 | 173 | Pfam | AP2 domain | 14 | 63 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi985g00005 | 173 | PRINTS | Ethylene responsive element binding protein signature | 37 | 53 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi985g00005 | 173 | PRINTS | Ethylene responsive element binding protein signature | 15 | 26 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi985g00005 | 173 | FunFam | Ethylene-responsive transcription factor 2 | 14 | 72 | - | - | |
Vivi985g00005 | 173 | SUPERFAMILY | DNA-binding domain | 14 | 71 | IPR016177 | GO:0003677 |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi985g00005 | 5 | 173 | AP2-EREBP Transcription Factor Family | AT1G28360 | 46.305 | 3.91e-45 | 145 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Vivi985g00005 | AP2 | 2.6e-14 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi985g00005 | - | - | cam:101504196 | 298.13 |