Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi97g00009 ATGCAAGAAGTTCACATAATGAGATCCCACAACAACCAGAATCTTCATCAAAATCATAATCATGCTTTGAAGTGTCCTCGTTGTGATTCCGTTAACACAAAGTTCTGTTACTACAACAACTACAACCTCTCTCAGCCTCGTCATTTCTGTAAAAGCTGCCGCCGTTACTGGACCAAAGGTGGCGTCCTCCGTAAAGTCCCCGTCGGCGGCGGTTCCCGCAAATCAAAGCACTCCAAAAACTCTAAGACGGTTTCATCTTCCTCCACCACCATCGCTCCAGCAGCAACAACACCACAGGAGGCGGACGAGTACAAGTCCAACAGTGAAAGCTCCGCCTTTACGACCACCGCCACTGAGGCGATAGCTATAGCGAAGACTCCGATATCAAACGCTACTAATGAACAAGTTAATAACTTCACGGGCCTTATCACTCGAAGTTCAAAAAACGATGTGTTTATGCTTAGGAACAATATCATCGATGCGTCGTCGTTTAGGTTTGGTGTGAATCATCATCATCAACATCAACAGCAATACGGGAATGATCAGGTACAGCGTGAAGATTCATCGGGTTTTTGTCAGTTGCAGCAACAGAGCAGTCATCAACGGTTGTCGTTGCTCAATCAGCAGCAGTTATCAAATGGATTTGGATCGTTGGATTGGCAAGGTAATTGTTTGTTTGATGTTCCTAACACCGTTGATGAGTCATACTGGACATATTCACATTGGTCTGATCATCATTTCAATCACTCTTCTTATCTTTTTCATCTTCCATGA 774 0.4432 MQEVHIMRSHNNQNLHQNHNHALKCPRCDSVNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRKVPVGGGSRKSKHSKNSKTVSSSSTTIAPAATTPQEADEYKSNSESSAFTTTATEAIAIAKTPISNATNEQVNNFTGLITRSSKNDVFMLRNNIIDASSFRFGVNHHHQHQQQYGNDQVQREDSSGFCQLQQQSSHQRLSLLNQQQLSNGFGSLDWQGNCLFDVPNTVDESYWTYSHWSDHHFNHSSYLFHLP 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi97g00009 257 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 15 204 IPR045174 GO:0003700|GO:0006355
Vivi97g00009 257 ProSiteProfiles Zinc finger Dof-type profile. 23 77 IPR003851 GO:0003677|GO:0006355
Vivi97g00009 257 ProSitePatterns Zinc finger Dof-type signature. 25 61 IPR003851 GO:0003677|GO:0006355
Vivi97g00009 257 Pfam Dof domain, zinc finger 21 77 IPR003851 GO:0003677|GO:0006355
Vivi97g00009 257 MobiDBLite consensus disorder prediction 67 111 - -
Vivi97g00009 257 MobiDBLite consensus disorder prediction 81 111 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi97g00009 7 257 C2C2-Dof Transcription Factor Family AT5G60850 37.413 1.45e-42 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Vivi97g00009 zf-Dof 3e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi97g00009 - - cam:101508706 238.424