Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi975g00016 ATGGCTGCAATAGGAAGTGCTTTCCTCACTGGATCTATTCAAACCTTAATTCAAACCTTAGCTGACAAACTTGTTTCCAAAGAGTTTCTTGATTGCATCAAAAACACCAAGCTCGATGACTCACTCTTGAAACAGTTAAGACTAAGATTACTCACTCTTAAAGTTGTGCTAGATGTTGCAAAGGAGAAGCAGATCAACACTCCTTCTGTCAAACAATGGCTTGATGTCTTGAAAGATGCTGTCTTCCATGCTGAAGATTTGATCAACCAAATTAGCTATATTTCCCTTCAACGCCGGATGGAGAGCAGCAAAACTAATCAAGTGTGGAGCTTGGTTTCTTCTCCTTTTAAAAATGCCTATGGTGACATCAATTCCCAAATGAAAGACATGTGTGAAACCCTCAAACTTTTTGCACAACATAAAGATGTAGTCAGTTTGCAAACTAGAAGAAGTGTCGGAGTTTCTCATAGAACACCTTCAACTTCTATGGTCAATGAATCTGTCATGGTTGGTAGACAAGATGACAAAGATATAATAATGAACATGCTGCTATCAGATAACGTCGTCACTAACAGGAAAAATATAGAGGTTATTGCAATTTTAGGCACGGGAGGTGTCGGAAAAACAACACTTGCACAACTTGCTTACAATGATGAAAATATTCAAAGACTCTTTCAACTCAAAGCATGGGCTTGTGTATCGGAGGATTTTGATATTTTTAAGAGAATTTTGAGGGGCAAGAGATTTTTCATTGTGTTGGATGACTTAAGGAATGTCAATTATATTAATTGGGATGAACTTGTAACTCCTTTGATTAGTGGAGAAACTGGAAGTAGAGTGATCATCACAACACGCCATAGAAAAGTGGCAGATGCTGCACGCACATTTTCTATTTTTGAATTATATCCTCTATCAGATGAAGACAGTTGGTCTTTACTCTCCAAACATGCATTTGGAGGTGGAGACTTTTCTGAAAGTAAATGCCAAAACCTTGAAGCAGTTGGCAGGGAGATTGCAAGAAAGTGTGGAGGATTACCAATAGCTGTGAAAACGGTTGGAGGACTATTGCGTTCGAAAGTAGATATTGAAGAGTGGGTTGAAGTTTTGAATAGTGACATATGGAACTTACCAATGGCCTAA 1140 0.3833 MAAIGSAFLTGSIQTLIQTLADKLVSKEFLDCIKNTKLDDSLLKQLRLRLLTLKVVLDVAKEKQINTPSVKQWLDVLKDAVFHAEDLINQISYISLQRRMESSKTNQVWSLVSSPFKNAYGDINSQMKDMCETLKLFAQHKDVVSLQTRRSVGVSHRTPSTSMVNESVMVGRQDDKDIIMNMLLSDNVVTNRKNIEVIAILGTGGVGKTTLAQLAYNDENIQRLFQLKAWACVSEDFDIFKRILRGKRFFIVLDDLRNVNYINWDELVTPLISGETGSRVIITTRHRKVADAARTFSIFELYPLSDEDSWSLLSKHAFGGGDFSESKCQNLEAVGREIARKCGGLPIAVKTVGGLLRSKVDIEEWVEVLNSDIWNLPMA 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi975g00016 379 Pfam NB-ARC domain 192 239 IPR002182 GO:0043531
Vivi975g00016 379 Pfam NB-ARC domain 241 370 IPR002182 GO:0043531
Vivi975g00016 379 Pfam Rx N-terminal domain 13 105 IPR041118 -
Vivi975g00016 379 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 376 IPR027417 -
Vivi975g00016 379 PRINTS Disease resistance protein signature 197 212 - -
Vivi975g00016 379 PRINTS Disease resistance protein signature 342 356 - -
Vivi975g00016 379 Coils Coil 43 63 - -
Vivi975g00016 379 Gene3D - 303 373 IPR042197 -
Vivi975g00016 379 PANTHER DISEASE RESISTANCE PROTEIN RP 71 371 IPR044974 GO:0006952
Vivi975g00016 379 Gene3D - 242 298 IPR027417 -
Vivi975g00016 379 Gene3D - 147 241 IPR027417 -
Vivi975g00016 379 Gene3D - 12 137 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi975g00016 169 315 WRKY Transcription Factor Family AT4G12020 25.424 6.11e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi975g00016 - - vvo:131638576 717.998