Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi975g00015 ATGGCCGCAACTATGATAGGAAATGCTTTCCTCTCTGCAACTGTTCAGACCTTAGTTCAGAAACTTGCTTCCAAAGAGTTTCTTGATTACATCACAAACACCAAGCTAGATCTCTCACTCTTGAAACAGATAAGACTAACACTTCTCACTCTTCAACCTCTTCTAGATGCTGCAGAGGAGAAGCAGATCAACACTCCTTCTGTCAAAGATTGGCTTGATGGCTTGAAAGATGCTGTCTACGATGCTGAAGATCTGCTCAACCAAATTAGCTATGATTCCCTTCGAAGCAAGATGGAGAACACACAAGCTGCAAGCAAAACTAAAAAGGTGTGGAACTTCCTTTCTTCTCCTTTTAAAAATATCTATGGAGAGATCAATTCCCAAATGAAAGATATGTGTGAAACCCTCAAACTTTTTGCTGATAATAAAGATATCCTTAGTTTGCAAACTAAAAGTGTCAGAGTTTCTTCTCATAGAACACCTTCAAGTCCTATGGTCAATGAATCTGTCATGGTTGGTAGGAAAGATGACCAAGAGAAAGTAATGAACATGCTGCTATCAGAAAGCAGTACTGACCAGAACAATATGGGCGTAGTTGCAATTGTAGGCATGGGAGGTGTCGGAAAAACAACACTTGCACAACTTGCATACAATGATGAAAATGTTCAAAAGCACTTTGATCTCACAGCATGGGCCTGTGTATCAGAGGATTTCGATATCCTTAGAGTAACCAAAACTCTCCTTGAATCTGTCACTAAAACACCACAGGAAACCAATAATCTTGATTTACTTCGAGTTGAGTTAAAGAAAAATTTAAGGGATAGGAGATTTTTCATTGTGTTGGATGACTTATGGAATGACAGTTGTTCTGATTGGGATGAACTTGTATCTCCGTTGATTTATGGAAAAAATGGTAGCAGAGTGATCATCACAACACGCCACAAAAAAGTGGCAGATGCTGCACGCACATTTCCTATTTTTGAATTAGATCCTCTATCAGATGAAGACAGTTGGTCTTTACTTTCCAAACATGCATTTGGAAGTGGAGACTTTTCTGAAACTCAACGCCGAAACCTAGAACCAATTGGCCAGGAGATTGCAAGAAAGTGTGGTGGATTGCCAATAGCTGCGAAATCACTTGGAGGACTGTTGCGTTCAAAAGTAGAAACTAAAGAGTGGATTGAAGTTCTGAACAGTGACATATGGAACTTACAGAATGATAATATTCTGCCTGCCTTGCGCCTGAGTTATCAATATCTTTCCTCTCAATTGAAAAGATGTTTTTCCTATTGCTCTATTTTTCCAAAGGACTATTTACTTGATAGGAAACAATTGGTTTTGTTATGGATGGCAGAAGGCTTCCTTGATCATTCTCAAGATAAAAAAACCATGGAAGAAGTAGGTGATGAGTGTTTTACTGAGTTGTTATCCAGATCATTGATTCAACAATTGCATGATGATTCTAGTGGGCAAACTTTTGTCTTGCATGACCTTGTTAATGATTTAGCTACTGTTGTATCTGGAAAAAGTTGTTACAGACTTGAATCAAGCGCTGAGAGCTATGAAAGTGTTCGACACTTTTCATATAATCAACAACTTTATGACATTTTCAAGAAGTTTAAGACTGTACACAAATTCAAATGCTTGAGAAGCTTCCTAGCCATTGACTATGATGAATGGGGAGAATATCATTTATCAAGAAAGGTGGTCGATGATTTTATACACACATTCGAAAGGTTGCGTGTGTTATCATTATCAAAATATGTAAACATCACCACACTACCGGACACAATTGGCAATTTAGTGCAGTTGCGCTATCTAGATCTCTCTTACATGAATATCGCAAGCTTGCCAGACACCATATGTAACCTCTACTACTTGCAAACCTTGATTTTATCTTGCTGCTCAAAACTCACAGAATTGCCTGAACATGTTGGTAAATTAGTTAACTTGCGTCATCTTTATATAGATATGACAAACATAATAGAGATGCCAAAGCAAATTGCTGAACTAGAAAACCTTCAAACACTAAATGTCTTTGTAGTAGGCATGAAAAATATTGGTTTAAGTGTCAGAGAGCTTGGGAAATTTCCTAAGCTACGAGGAGAATTATTCATCAAGAACTTACAAAATGTCATTGATGTCACGGAGGCAAGTGATACCAACTTGAAGAGCAGAGAACATATTGAGGAGTTAACGCTACAGTGGAGCGAGGAAGTTGATGACTCACTTAAAGGAAAAGATGTGCTTAATAAGTTACAACCATCACCAAACCTAAAGAAGCTGAGCATTGACTTATATGGCGGGACAAGTTTTCCAAGTTGGTTGGGAGATCCTTCATTTTCTAACATGGTGTCTCTGTGCATTGATAATTGTGTGAATTGCACGACACTTCCACCACTAGGGCAGCTACCTTCTCTCAAGGACTTGAAGATTGCTAGAATGCCAATTTTGAAGACAATTGGGCAGGAGTTCTATGGCATGGTAGCCGGAGGTTCCAACTCTCCGTTCCAACCATTTTCTTCCCTTGAGAAACTTGTAATTGAGAAAATGTCAAATTGGAAGGAATGGTGTCCTTTTCAAGGTGACATATTTCCTTTTCCGTGTCTTAAAACTCTGGAGTTATCTCAGTGTCTTGAATTGAAGGGACATCTGCCTAGTCAACTTCCTTCCATAGAAAAGATTAAAATAGATGGTTGTGATAATCTCTTGGGAACACCGCCTACTCAGCATTGGCTCTCCTCAATAAAAAGTATTTTTATGGTTGGAGATTCAAATTCAGAAAGCAATACTATTCAATGCTCATTGCTCGAGAGTGATTTTCCATGTCTACTGCAAGATATAACCATAAGGAGGTGTCATATGATAAAATCTGTACCTAAAATGATTATAAACAGCACCTGTCTACAAAAACTGACTCTTTATGGTATTAGTTCTCTCAGTGCGTTTCCAACAAATGGTTTACCCACTTCTTTGCAATCACTTCATATTGTCGAATGTGAGAATTTAACATTCCTACCTCCTGAAACATGGAGCAATTACACATCACTTGTGACTCTTGAATTACATAGTAGCTGCAATGCACTTACCTCATTCCCATTGAATTGTTTTCCTCTGCTCCAAAATCTCACTATCCTAAGATGCAAGAGTTTGGAATCTATTTTTATTTCAGAAACTTCTTCTTGTAGCTCGTTAACCCTCCAATATTTTTATGTCCATGAGTGCGAGGCACTTATATCACTACCTCAACGGATGGACACCCTCACCGCTCTTGAACATATACATCTCAGCAATCTTCCAAATTTGAATTTATCATTATGTGAAGGAGCTTTCCTACCTCCCAATTTACGAAAAATTGTTGTTGAATTTGTGAGGATAACAAAGCCGTTAACAGAGTGGGGTCTCCAATGTCTCACTGCTCTTTCATCATTGGGTATCGAAGGTGATGATATTGTGAACACGTTGCTCAAAGAGCCATTGTTGCCCATTTCCCTTGTGTGTCTAGATATCTGGAATCTCTCTGAAATGAAATCGTTGGAAGGAAATGGACTTCGACACCTCTCATCTCTAGAAGACCTTGGCATTCTTAATTGTCCAGGACTTGTATCGTTTCCAGAAAAAGTCTTTCCCTCCTCGCTGGAAAGACTTTATCTCGGAAATTGTCGAAGACTAGAGTCATTGCCCGTAGACAGCCTCCCTACCTCTCTCGAGGAACTGAGCATTTATGAATGCCCTTTGTTAGAAGAAAGATATAAAAGGAAGGAACATTGGTCCAGAATTGCTCACATCCCAGTCATACAAATAAATGACCAAGTCACAATATGA 3825 0.3875 MAATMIGNAFLSATVQTLVQKLASKEFLDYITNTKLDLSLLKQIRLTLLTLQPLLDAAEEKQINTPSVKDWLDGLKDAVYDAEDLLNQISYDSLRSKMENTQAASKTKKVWNFLSSPFKNIYGEINSQMKDMCETLKLFADNKDILSLQTKSVRVSSHRTPSSPMVNESVMVGRKDDQEKVMNMLLSESSTDQNNMGVVAIVGMGGVGKTTLAQLAYNDENVQKHFDLTAWACVSEDFDILRVTKTLLESVTKTPQETNNLDLLRVELKKNLRDRRFFIVLDDLWNDSCSDWDELVSPLIYGKNGSRVIITTRHKKVADAARTFPIFELDPLSDEDSWSLLSKHAFGSGDFSETQRRNLEPIGQEIARKCGGLPIAAKSLGGLLRSKVETKEWIEVLNSDIWNLQNDNILPALRLSYQYLSSQLKRCFSYCSIFPKDYLLDRKQLVLLWMAEGFLDHSQDKKTMEEVGDECFTELLSRSLIQQLHDDSSGQTFVLHDLVNDLATVVSGKSCYRLESSAESYESVRHFSYNQQLYDIFKKFKTVHKFKCLRSFLAIDYDEWGEYHLSRKVVDDFIHTFERLRVLSLSKYVNITTLPDTIGNLVQLRYLDLSYMNIASLPDTICNLYYLQTLILSCCSKLTELPEHVGKLVNLRHLYIDMTNIIEMPKQIAELENLQTLNVFVVGMKNIGLSVRELGKFPKLRGELFIKNLQNVIDVTEASDTNLKSREHIEELTLQWSEEVDDSLKGKDVLNKLQPSPNLKKLSIDLYGGTSFPSWLGDPSFSNMVSLCIDNCVNCTTLPPLGQLPSLKDLKIARMPILKTIGQEFYGMVAGGSNSPFQPFSSLEKLVIEKMSNWKEWCPFQGDIFPFPCLKTLELSQCLELKGHLPSQLPSIEKIKIDGCDNLLGTPPTQHWLSSIKSIFMVGDSNSESNTIQCSLLESDFPCLLQDITIRRCHMIKSVPKMIINSTCLQKLTLYGISSLSAFPTNGLPTSLQSLHIVECENLTFLPPETWSNYTSLVTLELHSSCNALTSFPLNCFPLLQNLTILRCKSLESIFISETSSCSSLTLQYFYVHECEALISLPQRMDTLTALEHIHLSNLPNLNLSLCEGAFLPPNLRKIVVEFVRITKPLTEWGLQCLTALSSLGIEGDDIVNTLLKEPLLPISLVCLDIWNLSEMKSLEGNGLRHLSSLEDLGILNCPGLVSFPEKVFPSSLERLYLGNCRRLESLPVDSLPTSLEELSIYECPLLEERYKRKEHWSRIAHIPVIQINDQVTI 1274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi975g00015 1274 Gene3D - 331 421 IPR042197 -
Vivi975g00015 1274 Gene3D - 14 127 - -
Vivi975g00015 1274 PRINTS Disease resistance protein signature 865 881 - -
Vivi975g00015 1274 PRINTS Disease resistance protein signature 271 285 - -
Vivi975g00015 1274 PRINTS Disease resistance protein signature 198 213 - -
Vivi975g00015 1274 PRINTS Disease resistance protein signature 370 384 - -
Vivi975g00015 1274 PANTHER DISEASE RESISTANCE PROTEIN RP 55 900 IPR044974 GO:0006952
Vivi975g00015 1274 Gene3D - 151 324 IPR027417 -
Vivi975g00015 1274 Pfam Rx N-terminal domain 10 105 IPR041118 -
Vivi975g00015 1274 SUPERFAMILY L domain-like 495 927 - -
Vivi975g00015 1274 Pfam NB-ARC domain 175 427 IPR002182 GO:0043531
Vivi975g00015 1274 SUPERFAMILY L domain-like 943 1251 - -
Vivi975g00015 1274 FunFam Probable disease resistance protein At1g63360 417 505 - -
Vivi975g00015 1274 FunFam Probable disease resistance protein At1g61300 153 323 - -
Vivi975g00015 1274 Gene3D Ribonuclease Inhibitor 714 897 IPR032675 -
Vivi975g00015 1274 Gene3D Ribonuclease Inhibitor 1067 1258 IPR032675 -
Vivi975g00015 1274 Gene3D Ribonuclease Inhibitor 923 1066 IPR032675 -
Vivi975g00015 1274 Gene3D Ribonuclease Inhibitor 544 713 IPR032675 -
Vivi975g00015 1274 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 431 IPR027417 -
Vivi975g00015 1274 Gene3D - 422 504 IPR036388 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi975g00015 591 686 WRKY Transcription Factor Family AT4G12020 37.113 1.56e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi975g00015 - - tpra:123915821 1456.04