Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi975g00009 ATGGCTGCAATAGGAACTGCTTTCCTCTCTGCAATTGTTCAAACCTTAGTTGACAAACTTGCTTCCAAAGAGTTTCTTGATTACGTCACAAACACCAAACTCGATGCCTCACTCATGAAAAAATTAAGAGTAACACTACTCATTCTTCAACCTGTGCTAGAGGTTGCAGAGGAGAAGCAGATCAACACTCCTTCTGTCAAAGAATGGCTTGAGAGCTTGAAAGATGCTGTCTACGGTGCTGAAGATTTGCTCAACCAAATAACCTATGATTCCCTTCGATGCAAGATGGAGAACACACAAGCTGCAAGCAAAACTAATCAGGTGTGGAACATCCTTTCTTCTCCTTTTAAAAATATCTATGGTGAGATCAATTCACAATTAAAAGACATGTGTGAAATCCTGAAACTGTTTGCACAACACAAAGATATTATTAGTTTGCAAACTAAAAGTGTCATAGTTTCTCATAGAACATCTACAAGTCGTATATTCAATGAATCTGTCATGGTTGGTAGAAAAGATGACCAAGAGAAAGTAATGAACATGTTGCTAGCAGAAAGCAATACTAATATGGGGGTAGTTGCAATTGTAGGCATGGGAGGTATTGGAAAAACAACACTTGCACAACTTGTTTACAATGATGAAAAAGTTCAACAACACTTTGATTGCAGAGCATGGGCCTGTGTATCAGAGGACTTCAATATCCTTAGAGTAACCAAAACTCTCCTTGAATCAGTCACTAAAACACCATGGGAAACCAATAATCTTGACTTACTTCGAGTTGAGTTACAGAAAAATTTAAGGGACAAGAGGTTTTTTATTGTGTTAGATGACTTATGTAATGACAAATATTCTGATTGGGATGAACTTGTATCTCCATTGTATAGTGGAAAAATTGGAAGCAGAGTGATCATCACAACACGCAACAAAAGAGTGGCAGCTGCTGGAACCACATTTCCTATTTTTAAGTTAGATCTTCTATCAGATGAAGATAGTTGGTGTTTACTTTCCAAACATGCATTTGGAGGTGGAAACTTTTGTGAAACTACAATCCCAAACTTTGAAGCAGTTGGCAGAGAGATTGCAAGAAAGTGTGGAGGATTACCAATAGATGTGAAAAGAGTTGGAAGACTATTGCGTTCAAAAGTAGATATTGAAGAGTGGGTTGATGTTTTGAATAGTGACATATGGAACTTACCAATGGCCTAA 1206 0.3756 MAAIGTAFLSAIVQTLVDKLASKEFLDYVTNTKLDASLMKKLRVTLLILQPVLEVAEEKQINTPSVKEWLESLKDAVYGAEDLLNQITYDSLRCKMENTQAASKTNQVWNILSSPFKNIYGEINSQLKDMCEILKLFAQHKDIISLQTKSVIVSHRTSTSRIFNESVMVGRKDDQEKVMNMLLAESNTNMGVVAIVGMGGIGKTTLAQLVYNDEKVQQHFDCRAWACVSEDFNILRVTKTLLESVTKTPWETNNLDLLRVELQKNLRDKRFFIVLDDLCNDKYSDWDELVSPLYSGKIGSRVIITTRNKRVAAAGTTFPIFKLDLLSDEDSWCLLSKHAFGGGNFCETTIPNFEAVGREIARKCGGLPIDVKRVGRLLRSKVDIEEWVDVLNSDIWNLPMA 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi975g00009 401 PANTHER DISEASE RESISTANCE PROTEIN RP 62 393 IPR044974 GO:0006952
Vivi975g00009 401 Pfam NB-ARC domain 172 392 IPR002182 GO:0043531
Vivi975g00009 401 Gene3D - 325 395 IPR042197 -
Vivi975g00009 401 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 398 IPR027417 -
Vivi975g00009 401 PRINTS Disease resistance protein signature 192 207 - -
Vivi975g00009 401 PRINTS Disease resistance protein signature 265 279 - -
Vivi975g00009 401 PRINTS Disease resistance protein signature 364 378 - -
Vivi975g00009 401 Pfam Rx N-terminal domain 8 100 IPR041118 -
Vivi975g00009 401 Gene3D - 148 317 IPR027417 -
Vivi975g00009 401 Gene3D - 12 135 - -
Vivi975g00009 401 FunFam Probable disease resistance protein At1g61300 152 317 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi975g00009 168 311 WRKY Transcription Factor Family AT4G12020 29.677 8.69e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi975g00009 - - vvo:131659657 608.216