Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi975g00008 ATGGCTGCAACTATGATAGGAAGTGCTTTCCTCTCTGCAACTGTTCAGACCTTACTTGACAAACTTGTTTCCAAAGAGTTTCTTGATTACATAAAAAGCACCAAGCTCGATGTCTCACTCTTGAAACAGTTAAGGCTAACACTACTCACTCTTCAACCTGTGCTAGATGCTGCGGAGGAGAAGCAGATCAACACTCCTTCTGTCAAAGACTGGCTTGATGGCTTGAAAGATGCTGTCTATGATGCTGAAGATCTGCTTAACCAAATTAGCTATGATTCCCTTCGATGCAAGATGGAGAACACGCAACCTGCAAGCAAAACTAATCAGGTGTGGAACTTCCTTTCTTCTCCTTTTAAAAACATCTATGGAGAGATCAATTCCCAGATGAAAGATATGTGTGAAACCCTCAAACTTTTTGCTGATAACAAAGATATACTTAGTTTGCAAACTAAAAGTGTCAGAGTTTTTCATAGAACACCTTCAAATCCTATGTTCGATGAATCTGTCATGGTTGGTAGGAAAGATGACCTAGATAAAGTAATAAACATGTTGCTATCAGAAAGCAATACTAATATGGGCATAGTTGCAATTGTAGGCATGGGAGGCCTCGGAAAAACAACACTTGCACAACTTGTTTGTAATGATGAAAAAGTTCAAAACCACTTTGATCTCACAGCATGGGCTTGTGTATCAGAGGATTTTGATATCCTTAATGTAACCAAAACTCTCCTTGAATCTGTCACTAAAACACCATCAGGAACCGACAATCTTGATTTACTTCGAGTTGAGTTAAAGAAAAATTTAAGGGATAGGAGATTTTTCATTGTGTTGGATGACTTATGGAATGACAGTTGTTCTGATTGGGATGAACTTGTATCTCCGTTGATTTATGGAAAAAATGGAAGCAGGGTGATCATCACAACACGCCACAAAAAAGTGGCAGATGCTGCACGCACATTTCCTATTTTTGAGTTAGATCCTCTATCAGAAGAAGACATTTGGTCTTTACTCTCCAAACGTGCATTTGGAAGTGGTGACTTTTCTGAAACTCAATGCCGAAACCTAGAACCAATTGGCAGGAAGATTGCAAAAAAGTGTGGTGGATTGCCAATAGTTGCGAAATCACTTGGAGGACTGTTGCGTTCAAAAGTAGATACTGAAGAGTGGATTGAAGTTCTGAACAACGACATATGGAACTTAAAGGATGATAATATTCTGCCTGCATTGCGCCTGAGTTATCAATACCTTTCCTCTCAATTGAAAAGATGTTTTTCCTATTGCTCTATTTTTCCAAAGGACTATCCACTTGATAGGAAGCAATTGGTTTTGTTGTGGATGGCAGAAGGCTTCCTTGATCATTCTCATGACAAAAAAACTATGGAAGAAGTAGGTGATGAGTGTTTTACTGAATTGTTATCCAGATCATTGATTCAACAATTGCATGATGATTCTAGAGGACATAAATTTGTCTTGCATGACCTTGTTAATGATTTAGCTACGGTCGTATCTGAAAAAAGTTGTTACAGACTTGAATTTGGTGCTAAGAGCTATGAAAATGTTCGCCACTTGTCATATAATAAAGAAACATATGATATTGTAAAGAAGTTTAAGACTTTCGACAAATTCAAACGCTTGAGAAGCTTCCTTGCCATTGACTTTGGATGGTTAGAATATAATTTATCAAGAAATACGGTCAATTATTTGCTACCCACATTTGGAAGGTTGCGGGTGTTATCGTTATCAAGATATAGAAACATCACCATGCTACCCGTTACAATTGGCAACTTAGTGCAGTTGCGCTATCTAGATCTCTCTTACACGAATATCGCAAGCTTGCCTGACACCATATGCAACCTCTACTACTTGCAAACCTTGATTTTATCTTGCTGCTCAAAACTCACAGAATTTCCTAAAAATGTTGGAAAATTAAGTAATTTGCGTCATCTTTATATTGATATGACAAGCATAATAGAGATGCCGAAGCAAATTGCTGAACTAGAAAACCTTCAAACTCTAACTGTTTTTGTAGTAGGCAAGAAAAATATTGGTTTAAGTGTTAGAGAGCTTGGGAAGTTTCCTAAGCTACGGGGAAAGTTACTCATCAAGAACCTGCAAAATGTCAATGATGTCATGGAGGTAAGTGGTACCAACTTGAAGAGCAAAGAACATATTGATGAACTGACGCTACAGTGGGGCAAGGAAACCGATGACACACTTAATGAAAAAAATGTGCTTGATATGTTAGAACCATCTACAAACCTAGAAAAACTGCGCATTGGATCATATGGTGGGACAAGTTTTCCAAGTTGGTTTGGAGATCCTTCGTTTTCTAACATGGTGTCTCTCAGCATTAGTACTTGTGTGAATTGCATGACACTTCCACCACTAGGGCAGCTACCTTCTCTCAAGGACTTGAAGATTGCTAGAATGACATCTATTGTGGCAATTGGGCAAGAGCTCTATGGCATGGCAGCAGGAGGTTCCAATTCTTCGTTCCAACCATTTCAATCCCTTGAGAATTTGGAATTTTCGTTCATGGGAAATTGGAAGGAGTGGTGTCCTTTTCCAGACAACATGTTTCCTTTTCCTCGTCTCAAAACTCTGAGGTTAGTAAGGTGTCCCAAATTGAAAGGACATTTACCTAGTCATCTTCCTTCCTTAGAAGAGATTGAAATATATGATTGTGATCATCTCTTGGCAACACCACCTACTCCACATTGGCTCTCCTCAATAAAAAAGATTCGTATTGTGGAAGATTCAGACTCAATAAGCAATACTGAAAGGAACCAATACTCATTGCTCGAGAGTGATTCTCCATGTCTGCTGCAAACAATAGACATATGGAGCCGTCATATGCTAAAATCTGTACCTAAAATGATTATAAACAGCACCTCTCTTCGAGAATTGGATCTCAATGGTATTAGTTCTCTCACTACGATTCCAACGAATGGCTTACCCACTTCTTTGCAATCACTTTCTATTACAAATTGTGAGAACTTAGCATTCTTTCCTCCTGAAATGTGGAGCAATTACACATCCCTTGGGACTCTTACATTAGAAGACTGCAATGCACTTACCTCCGTCCCATTGAATTGTTTTCCTATGCTCCAGAATTTTTCCATCTATGATTGTAACAGTTTGGAATCTATTTTTATTTCAGAAACTTCTTCCTGTAGCTCTTCAACCCTCCAATCTTTTCATGTCCGTGATTGCGAGGAACTTAGATCACTACCTCAACGGATGGGCACCCTCACTGCTCTTGAAAAGATATTTCTCCGCAATCTTCCAAAATTGAATTTATCATTATGTGAAGGAGTTTTCCTACCTCCCAATTTACAATCAATTGTGGTAGATTCTGTGAGGATAACAAAGCCGGTAACAGAGTGGGGTTTCCAATGTCTCACTGCTCTTTCATCATTGCAAATTATGGGTGATGATATTGTGAACATATTGCTCAAAGAGCCGTTGTTGCCCATTTCCCTTGTGTCTCTATATATCCGTAATCTCTTTGCTGATTGTCCAGGGCTTGTATCATTGCCAGAAAAAGCCTTCCCCTCCTCGCTGAAATCACTTGATTTTTATGAGTGTACAAGACTAAAGTCATTCCCAGAAAACAGTCTTCCTACCTCTCTTGAGGTACTGTGCATTTCTAATTGCCCATTGTTAGAACAAAGGTATAAAAGGAAGGAACATTGGTCCAAAATTTCTCACATCCCAGTCATAAGAATAAATGAGCAAGTCACAATATGA 3750 0.3877 MAATMIGSAFLSATVQTLLDKLVSKEFLDYIKSTKLDVSLLKQLRLTLLTLQPVLDAAEEKQINTPSVKDWLDGLKDAVYDAEDLLNQISYDSLRCKMENTQPASKTNQVWNFLSSPFKNIYGEINSQMKDMCETLKLFADNKDILSLQTKSVRVFHRTPSNPMFDESVMVGRKDDLDKVINMLLSESNTNMGIVAIVGMGGLGKTTLAQLVCNDEKVQNHFDLTAWACVSEDFDILNVTKTLLESVTKTPSGTDNLDLLRVELKKNLRDRRFFIVLDDLWNDSCSDWDELVSPLIYGKNGSRVIITTRHKKVADAARTFPIFELDPLSEEDIWSLLSKRAFGSGDFSETQCRNLEPIGRKIAKKCGGLPIVAKSLGGLLRSKVDTEEWIEVLNNDIWNLKDDNILPALRLSYQYLSSQLKRCFSYCSIFPKDYPLDRKQLVLLWMAEGFLDHSHDKKTMEEVGDECFTELLSRSLIQQLHDDSRGHKFVLHDLVNDLATVVSEKSCYRLEFGAKSYENVRHLSYNKETYDIVKKFKTFDKFKRLRSFLAIDFGWLEYNLSRNTVNYLLPTFGRLRVLSLSRYRNITMLPVTIGNLVQLRYLDLSYTNIASLPDTICNLYYLQTLILSCCSKLTEFPKNVGKLSNLRHLYIDMTSIIEMPKQIAELENLQTLTVFVVGKKNIGLSVRELGKFPKLRGKLLIKNLQNVNDVMEVSGTNLKSKEHIDELTLQWGKETDDTLNEKNVLDMLEPSTNLEKLRIGSYGGTSFPSWFGDPSFSNMVSLSISTCVNCMTLPPLGQLPSLKDLKIARMTSIVAIGQELYGMAAGGSNSSFQPFQSLENLEFSFMGNWKEWCPFPDNMFPFPRLKTLRLVRCPKLKGHLPSHLPSLEEIEIYDCDHLLATPPTPHWLSSIKKIRIVEDSDSISNTERNQYSLLESDSPCLLQTIDIWSRHMLKSVPKMIINSTSLRELDLNGISSLTTIPTNGLPTSLQSLSITNCENLAFFPPEMWSNYTSLGTLTLEDCNALTSVPLNCFPMLQNFSIYDCNSLESIFISETSSCSSSTLQSFHVRDCEELRSLPQRMGTLTALEKIFLRNLPKLNLSLCEGVFLPPNLQSIVVDSVRITKPVTEWGFQCLTALSSLQIMGDDIVNILLKEPLLPISLVSLYIRNLFADCPGLVSLPEKAFPSSLKSLDFYECTRLKSFPENSLPTSLEVLCISNCPLLEQRYKRKEHWSKISHIPVIRINEQVTI 1249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi975g00008 1249 SUPERFAMILY L domain-like 929 1224 - -
Vivi975g00008 1249 Gene3D Ribonuclease Inhibitor 530 926 IPR032675 -
Vivi975g00008 1249 Pfam NB-ARC domain 174 421 IPR002182 GO:0043531
Vivi975g00008 1249 Gene3D - 327 417 IPR042197 -
Vivi975g00008 1249 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 427 IPR027417 -
Vivi975g00008 1249 Gene3D - 14 130 - -
Vivi975g00008 1249 Gene3D Ribonuclease Inhibitor 1107 1238 IPR032675 -
Vivi975g00008 1249 PRINTS Disease resistance protein signature 961 977 - -
Vivi975g00008 1249 PRINTS Disease resistance protein signature 194 209 - -
Vivi975g00008 1249 PRINTS Disease resistance protein signature 267 281 - -
Vivi975g00008 1249 PRINTS Disease resistance protein signature 366 380 - -
Vivi975g00008 1249 Pfam Rx N-terminal domain 10 102 IPR041118 -
Vivi975g00008 1249 PANTHER DISEASE RESISTANCE PROTEIN RP 55 896 IPR044974 GO:0006952
Vivi975g00008 1249 Gene3D Ribonuclease Inhibitor 939 1106 IPR032675 -
Vivi975g00008 1249 FunFam Probable disease resistance protein At1g63360 413 501 - -
Vivi975g00008 1249 Gene3D - 418 500 IPR036388 -
Vivi975g00008 1249 Gene3D - 155 320 IPR027417 -
Vivi975g00008 1249 FunFam Probable disease resistance protein At1g61300 153 319 - -
Vivi975g00008 1249 SUPERFAMILY L domain-like 491 916 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi975g00008 181 541 WRKY Transcription Factor Family AT5G45050 22.888 1.57e-07 54.3