Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi975g00006 ATGCTCACTTGTCAAAATATCAATTATTGCTTTCCATCAATTATTGAATCATTATTCACATATGACTCTTGCTTTACTATTACCACTGTCAAACTTTTGCTAATCAACATGGCTGCAATAGGAAGTGCTTTCCTCTCTGCAACTGTCCAGACCTTAGTTGAGAAACTTGCTTCCAAAGAGTTTCTTGATTACATCACAAACACTAAGCTTGACGTCTCACTCTTGAAACAGTTAAGAGCAACACTACGCACTCTTCAACCTGTGCTTGACGCTGCGGAGGAGAAGCAGATCAACACTCCTTCTGTCAAAGAATGGCTTGATGACTTGAAAGATGCTGTCTACGACGCTGAAGATTTGCTCAACCAAATTAGCTATGATTCCCTTCGATGCAAGATGGAGAACATACAAGCTGCAAGCAAAACTAAACAGGTGTGGAACTTACTTTCTTCTCCTTTTAAAAATATCTATGGAGAGATCAATTCCCAAATGAAAGATATGTGTGAAACCCTCAAACTTTTTGCTGATAATAAAGATATACTCAGTTTGCAAACTAGAAGTGTCAGAGTTTCTCATAGAACACCTTCAAGTCCTATGGTCAACGAATCTGTCATGGTTGGTAGGAAAGATGACCAAGAGAAAGTAATGAACATGTTTCTATCAGAAAGCAATACTAATATGGGCGTAGTTGCAATTGTAGGCATGGGAGGTGTCGGAAAAACAACACTTGCACAACTTGCTTACAATGATAAAAAAGTTCAACACCACTTTGATCTCACAGCATGGGCTTGCGTATCAGAAGATTTTGATGTTTTTAGAGTAACCAAAACTCTCCTTGAATCTGTCACTAAAACACCATGGGAAACCAATAATCTTGATTTACTTCGAGTTGAGTTAAAGAAAAATTTAAGGGATAGGAGATTTTTCATTGTGTTGGATGACTTATGGAATGACACTCATCATGATTGGGATGAACTTGTATCTCCGTTGATTTATGGGAAAAATGGAAGCAGAGTGATCATCACAACACGCCTAAAAAAAGTGGCAGATGCTGCACGCACATTTCCTATTTTTGAATTAGATCTTCTATCGGATGAACACAGTTGGTCTTTACTCTCCAAACATGCATTTGGAAGTGGAGACTTTTCTGAAACTCAAAAGCAAAATGTAGAAGCAATTGGAAGGAAGATTGCAAGAAAGTGTGGTGGATTGCCAATAGCTGCGAAATCACTTGGAGGACTGTTGCGTTCAAAAGTAGATACTGAAGAGTGGATTGAAGTTTTGAACAATGACATATGGAAGTTAAAGAATGATAATATTCTGCCTGCATTGCGCCTGAGTTATCAATATCTTCCCTCTCAATTGAAAAGATGTTTTTCCTATTGCTCTATTTTTCCAAAGGACTATCCACTTGATAGGAAGCAATTGGTTTTGTTGTGGATGGCAGAAGGCTTCCTTGATCATTCTCAAGACAAAAAAACCATGGAAGAAGTAGGTGATGAGTGTTTTATTGAATTGTTATCCAGATCATTGATTCAACAATTGCATGATGATTCTCGTGGGCAAACTTTTGTCTTGCATGACCTTGTTAATGATTTAGCTACTGTTGTATCTGGAAAAAGCTGTTACAGACTTGAATCAGGCAATGAAAGCTATGAAAATGTTCGACACTTTTCATATAATCAAGAATCTTATGACATTTTCAAGAAGTTTAAGACTTTCTACAAATTCAAATGCTTGAGAAGCTTCCTACCCATGGAATCTGCCAGATGGGGTACTTATCATTTATCAAGAAAGGTGGTCGATGATTTTCTATCAACATTCGAAAGGTTGCGTGTGTTGTCATTATCAAAATATGAAAATATCACCACACTACCAGACACAATTGGCAATTTAGTGCAGTTGCGCTATCTAAATCTCTCTTACACTCTAATCAAAAGCTTGCCTGACACCATATGCAGCCTCTACTACTTGCAAACCTTGATTTTATCTTGCTGCTCAAAACTCACAGAATTGCCAGAACATGTCGGAAAGTTAATTCATTTGCGTCACCTGTATATTGATAGGACAAGCATTATAGAAATGCCGAAGCAAATTGCGGAACTAGAAAACCTTCAAACTCTAACTGTTTTTGTAGTAGGCAAGAAAAATATTGGTTTAAGTGTCAGAGAGCTTGGGAAGTTTCCTAAGCTACGGGGAAAGTTATTCATCAAGAACTTACGAAATGTCATTGATGTCATGGAGGCAAGTGATACCGACTTGAAGAGCAAAGAACATATTGAGGAATTGACGCTAGAGTGGGGCAAGGAAACTGATGACACACTTAATGAAAAAATTGTGCTTGATATGTTAGAACCATCTACAAACCTAGAGAAACTGAGCATTGTATCATATGGTGGGACAAGTTTTCCAAGTTGGTTTGGAGATCCTTCTTTTTCTAACATGGTGTCCCTCCGCATTAATATCTGTGTGAATTGCATGACACTTCCACCACTTGGGCAGCTACCTTCTCTCAAGGACTTGCAAATTGGTTGGATGACAATTTTGGAGACAACTGGGCAGCAGTTCTATGGCATGGCAGCAGGAGGTTCCCATTCTTCGTTCCAACCATTTCAGTCCCTTGAGAATTTGGAATTTTTGTACATGGAAAATTGGAAGGAATGGTGTCCTCTTCCAGACAACATGTTTCCTTTTCCTCGTCTGAAAACTCTGAGGTTATCAAGGTGTCCCAAATTGAAAGAACATTTACCTAGTCATCTTCCTTCCTTAGAAGAGATTGAAATATTTGCTTGTGATCATCTCTTGGCAACACCACCAACTCAGCATTGGCTCTCCTCAATAAAAAAGATTCGTATTGTAGAAGATTCAAATTCAGATTCAATAAGCAATACCGAAAGGACCCAATACTCATTGCTCGATAGTGATTCTCCATTCCTACTGCAAACAATAGACATATGGAGCTGTCATATGCTAAAATCTGTACCTAAAATGATTATTAACAGCACCTGTCTTCGACACTTGACACTCTATGGTATTAATTCTCTCACGACGATTCCAGCAAATGGTTTACCCACTTCTTTGCAATCACTTTGTATTCGAAAATGTGAGAATTTAACATTCCTTCCTCCTGAAATGTGGAGCAATTACACATCCCTTGTGACTCTTAATTTAAACGACTGCAACGCACTTACCTCCTTCCCATTGAATTGTTTTCCTATGCTCCAAGATCTTTCCATCAAGGAATGTAGGAGTTTGGAATCTATTTTTTCCCCAGAAACTTCTTCTTGTAGCTTGTCAACCCTCCAATCTTTTGAAGTCCATGAGTGCGAGGCACTTAGATCACTACCTCAACGGATGGATACCCTAACTGCTCTTGAAAAGATATTTCTACGCAATCTTCCAAATTTGAATTTATCATTATGTGAAGGAGTTTTCCTACCTCCCAATTTACAATCAATTGTGGTTGATTCTGTGGGGATAGCAAAGCCGGTAAGAGAGTGGGGTCTCCAATGTCTCACTGCTCTTTCATCATTGCAAATTAGGGGTGATGATATTGTGAACATATTGCTTAAAGAGCCGTTGTTGCCCATTTCCCTTGTGTATCTGTCAATCAAGAATCTCTCTGAAATGAAATCCTTAGAAGGAAATGGACTTCGACGCCTCTCCTCTCTAGAAACCCTTTATTTTGATGGCTGTCCAGGGCTTGTGTCATTGCCAGAAAAAACCTTTCCCTCCTCGCTGAAAACACTTCGGTTGTGTAATTGTCCAAAACTAGAGTCATTGCCACAAAAAGCCTTTCCCTCCTCGCTGAAATCACTTTTTATTTATGATTGTGAAAGACTAGAGTCATTGCCAGAAGACAGCCTCCCTTCCTCTTTAGAGCATTTGTTCATTAGAGATTGTCCATTGTTAGAAGAAAGGTATAAAAGGAAGGAACATTGGTCCAAAATTGCTCACATCCCAGTCATAAAAATAAAAAACCAACTCACAATATGA 3993 0.3864 MLTCQNINYCFPSIIESLFTYDSCFTITTVKLLLINMAAIGSAFLSATVQTLVEKLASKEFLDYITNTKLDVSLLKQLRATLRTLQPVLDAAEEKQINTPSVKEWLDDLKDAVYDAEDLLNQISYDSLRCKMENIQAASKTKQVWNLLSSPFKNIYGEINSQMKDMCETLKLFADNKDILSLQTRSVRVSHRTPSSPMVNESVMVGRKDDQEKVMNMFLSESNTNMGVVAIVGMGGVGKTTLAQLAYNDKKVQHHFDLTAWACVSEDFDVFRVTKTLLESVTKTPWETNNLDLLRVELKKNLRDRRFFIVLDDLWNDTHHDWDELVSPLIYGKNGSRVIITTRLKKVADAARTFPIFELDLLSDEHSWSLLSKHAFGSGDFSETQKQNVEAIGRKIARKCGGLPIAAKSLGGLLRSKVDTEEWIEVLNNDIWKLKNDNILPALRLSYQYLPSQLKRCFSYCSIFPKDYPLDRKQLVLLWMAEGFLDHSQDKKTMEEVGDECFIELLSRSLIQQLHDDSRGQTFVLHDLVNDLATVVSGKSCYRLESGNESYENVRHFSYNQESYDIFKKFKTFYKFKCLRSFLPMESARWGTYHLSRKVVDDFLSTFERLRVLSLSKYENITTLPDTIGNLVQLRYLNLSYTLIKSLPDTICSLYYLQTLILSCCSKLTELPEHVGKLIHLRHLYIDRTSIIEMPKQIAELENLQTLTVFVVGKKNIGLSVRELGKFPKLRGKLFIKNLRNVIDVMEASDTDLKSKEHIEELTLEWGKETDDTLNEKIVLDMLEPSTNLEKLSIVSYGGTSFPSWFGDPSFSNMVSLRINICVNCMTLPPLGQLPSLKDLQIGWMTILETTGQQFYGMAAGGSHSSFQPFQSLENLEFLYMENWKEWCPLPDNMFPFPRLKTLRLSRCPKLKEHLPSHLPSLEEIEIFACDHLLATPPTQHWLSSIKKIRIVEDSNSDSISNTERTQYSLLDSDSPFLLQTIDIWSCHMLKSVPKMIINSTCLRHLTLYGINSLTTIPANGLPTSLQSLCIRKCENLTFLPPEMWSNYTSLVTLNLNDCNALTSFPLNCFPMLQDLSIKECRSLESIFSPETSSCSLSTLQSFEVHECEALRSLPQRMDTLTALEKIFLRNLPNLNLSLCEGVFLPPNLQSIVVDSVGIAKPVREWGLQCLTALSSLQIRGDDIVNILLKEPLLPISLVYLSIKNLSEMKSLEGNGLRRLSSLETLYFDGCPGLVSLPEKTFPSSLKTLRLCNCPKLESLPQKAFPSSLKSLFIYDCERLESLPEDSLPSSLEHLFIRDCPLLEERYKRKEHWSKIAHIPVIKIKNQLTI 1330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi975g00006 1330 Gene3D - 361 445 IPR042197 -
Vivi975g00006 1330 FunFam Probable disease resistance protein At1g61300 187 353 - -
Vivi975g00006 1330 Gene3D - 446 535 IPR036388 -
Vivi975g00006 1330 PRINTS Disease resistance protein signature 301 315 - -
Vivi975g00006 1330 PRINTS Disease resistance protein signature 228 243 - -
Vivi975g00006 1330 PRINTS Disease resistance protein signature 400 414 - -
Vivi975g00006 1330 PRINTS Disease resistance protein signature 1046 1062 - -
Vivi975g00006 1330 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 461 IPR027417 -
Vivi975g00006 1330 Gene3D Ribonuclease Inhibitor 1137 1320 IPR032675 -
Vivi975g00006 1330 Gene3D - 186 354 IPR027417 -
Vivi975g00006 1330 SUPERFAMILY L domain-like 975 1305 - -
Vivi975g00006 1330 SUPERFAMILY L domain-like 525 953 - -
Vivi975g00006 1330 Gene3D Ribonuclease Inhibitor 577 962 IPR032675 -
Vivi975g00006 1330 PANTHER DISEASE RESISTANCE PROTEIN RP 78 908 IPR044974 GO:0006952
Vivi975g00006 1330 Gene3D Ribonuclease Inhibitor 971 1136 IPR032675 -
Vivi975g00006 1330 Gene3D - 48 162 - -
Vivi975g00006 1330 Pfam NB-ARC domain 208 429 IPR002182 GO:0043531
Vivi975g00006 1330 Pfam Rx N-terminal domain 44 139 IPR041118 -
Vivi975g00006 1330 FunFam Probable disease resistance protein At1g63360 447 535 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi975g00006 621 716 WRKY Transcription Factor Family AT4G12020 38.144 3.92e-07 53.1