Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi974g00018 ATGTTTGCCGTAAAGGACAAGCTAGATATCACAATTGGAGTTGCTGTTGGATCATCAACCCAGATATCGATGTTTGTGATCCCTTTCTGTGTGGTTGTTGGATGGTGCATGGGAAAAGAAATGGACTTGAATTTTCAACTCTTTGAGACTGCCACACTTTTTATCACTATGCTGGTAGTTGCATTTATGATGCAGGAAGGGACCTCAAACTATTTTAAAGGCTTAATGCTTATTCTATGCTATCTTATAATTGCTGCCAATTTTTTTGTACATGTCGACCCTAAAAGTGGTGAGTGA 297 0.3872 MFAVKDKLDITIGVAVGSSTQISMFVIPFCVVVGWCMGKEMDLNFQLFETATLFITMLVVAFMMQEGTSNYFKGLMLILCYLIIAANFFVHVDPKSGE 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi974g00018 98 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 1 94 IPR004713 GO:0006812|GO:0008324|GO:0016020
Vivi974g00018 98 Pfam Sodium/calcium exchanger protein 1 87 IPR004837 GO:0016020|GO:0055085
Vivi974g00018 98 Gene3D - 1 89 IPR044880 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi974g00018 1 98 Antiporters AT1G55730 76.531 1.51e-51 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi974g00018 K07300 - vvo:131638535 198.749