Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi972g00020 ATGGATTCAACTCAACATCAACATGTCCCTTATGGAATTAATCATAGGATTAACAACTCTTCATCAAGTTTAATGAATGAAGGATCTGGTTTTGATTTTGGGGAGCTAGAAGAAGCAATAGTTCTGCAAGGAGTTAAGAGTAGAAATGATGAAACAAAAGCATCTTTTTTCACGGCTAGACCTTCTGCTACACTGGAAATGTTCCCTTCTTGGCCAATGAGATTCCATCAAAACTCTACAGGAGGAAACAAATCAGGAGGGGAAAGCAGTGATTCAGCGCTATCAAGCAAAAACGAGAATCCTTTTGAGGAAGAATCACCATTAAGTTGTAAAAAAGGAACATCATTTTCATCAGATAATAATAATAATCAGAATCAGATTTTTGAAGAGCAGAATCTGCAGCTACTACAACAACAGAAGATGATAGCAAATGATGGTATAAGAACAGCCTCTTCATCACAGAATCAATCAGCAGAAGCAGGCAAAGAAAAGAAAAAGGGAGGTGGTTCAACTTCAGATAAGCCACTAGATGCAAAGACATTGAGACGTTTAGCACAAAACAGGGAAGCTGCAAGGAAAAGTCGTCTAAGGAAAAAGGCTTATGTTCAGCAACTAGAGTCAAGTAGATTAAAGCTTACACAATTGGAACAAGACCTTCAAAGAGCAAGATCTCAGGGTATGTTCATGGATTGGAGTGGGGGTGTTGGTGGCAATATTAGCTCTGGAGGTGCAATGTTTGACATGGAATATGGAAGATGGTTAGAAGATGACAACCGTTTATTAACGGAGTTAAGAAACGGTTTACAAACCGCTTTAACAGAAAATGAAATGAGAGTAATGGTGGATGGGTATTTATGTCATTATGATCAAATATTTAGAGTGAAAGGAATCACTGCAAAAACAGACGTGTTTCATCTTATCAATGGCATGTGGACTTCTCAAGCTGAACGTTGTTTCCTTTGGATTGGTGGCTTTAGACCCTCCGAAATTATCACGATGTTGATTCAACAACTGGAACCACTAGCTGAGCAGCAAATAATGGGAATGTATGGACTGAGACATTCTTCACAGCAAGCAGAAGAAGCTCTCTCGCAAGGACTTGATCAGTTGCAACAATCTCTTGTTGACACCATTGCTGGAGGACCACTTGTTGATGGTGTTCAACAAATGGTCGTCGCCATGGGCAAGCTTTCTAATCTCGAAGGATTTCTTCGTCAGGCTGATAATTTGAGGCAGCAAACTCTTCACCAATTGTGTCGATTACTGACACTTCGTCAAGCTGCACGTGCTTTTCTTGTTATCGGAGAATATTATGGACGACTTCGAGCTCTTAGTTCCCTTTGGGCATCAAGACCACGAGAGACCATGATGAGTGATGATAACTCATGCCAAACAACCACAGACATGCAAATGGTTCAACCTTCTCAGAATCATTTCTCAAGTTTCTGA 1449 0.4017 MDSTQHQHVPYGINHRINNSSSSLMNEGSGFDFGELEEAIVLQGVKSRNDETKASFFTARPSATLEMFPSWPMRFHQNSTGGNKSGGESSDSALSSKNENPFEEESPLSCKKGTSFSSDNNNNQNQIFEEQNLQLLQQQKMIANDGIRTASSSQNQSAEAGKEKKKGGGSTSDKPLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQDLQRARSQGMFMDWSGGVGGNISSGGAMFDMEYGRWLEDDNRLLTELRNGLQTALTENEMRVMVDGYLCHYDQIFRVKGITAKTDVFHLINGMWTSQAERCFLWIGGFRPSEIITMLIQQLEPLAEQQIMGMYGLRHSSQQAEEALSQGLDQLQQSLVDTIAGGPLVDGVQQMVVAMGKLSNLEGFLRQADNLRQQTLHQLCRLLTLRQAARAFLVIGEYYGRLRALSSLWASRPRETMMSDDNSCQTTTDMQMVQPSQNHFSSF 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi972g00020 482 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 177 221 IPR004827 GO:0003700|GO:0006355
Vivi972g00020 482 MobiDBLite consensus disorder prediction 68 123 - -
Vivi972g00020 482 FunFam BZIP family transcription factor 178 227 - -
Vivi972g00020 482 ProSiteProfiles DOG1 domain profile. 243 451 IPR025422 GO:0006351|GO:0043565
Vivi972g00020 482 Coils Coil 198 225 - -
Vivi972g00020 482 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 182 197 IPR004827 GO:0003700|GO:0006355
Vivi972g00020 482 SMART brlzneu 175 241 IPR004827 GO:0003700|GO:0006355
Vivi972g00020 482 CDD bZIP_HBP1b-like 179 229 - -
Vivi972g00020 482 Pfam bZIP transcription factor 178 220 IPR004827 GO:0003700|GO:0006355
Vivi972g00020 482 PANTHER TRANSCRIPTION FACTOR TGA9 112 454 - -
Vivi972g00020 482 Pfam Seed dormancy control 261 335 IPR025422 GO:0006351|GO:0043565
Vivi972g00020 482 MobiDBLite consensus disorder prediction 147 180 - -
Vivi972g00020 482 MobiDBLite consensus disorder prediction 73 103 - -
Vivi972g00020 482 SUPERFAMILY Leucine zipper domain 179 221 IPR046347 GO:0003700|GO:0006355
Vivi972g00020 482 MobiDBLite consensus disorder prediction 159 180 - -
Vivi972g00020 482 Gene3D - 178 227 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi972g00020 158 482 bZIP Transcription Factor Family AT1G08320 70.769 2.42e-177 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi972g00020 DOG1 8.4e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi972g00020 K14431 - gmx:100775461 685.256