Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi971g00012 ATGACGCATATTCTAACCCAAATTTGGGGATGGGTGGTGCAGCCAGAAGTGTGGAGATTTGTAGGCTTTGCCTCGGCTGTTGTTGGACTCGTCTGTTATGCTCTAAGCTCTTCCTTCAACTATCTCTTTGGAGATTGGAATCTCTTGAAGATTTTTCTTTACTGCGTTTTCAGTTTCATCATCAGCCTCATGATTTTCTTTGCAAAATTATTACAACACTCCACAAGTCTTCGGTTCAAAGCTCATACAGCATTTCTTGTACTAGCAATCACATCTGCCTATTCCTTTTTCTTCGACAAAGTGGTGAATGGGAAACCAGATCTATATAGCCTCATTTCATATGCTGCCTTTGCTATCATGTCACTCAGCCTGTCGAGGCAAACTCCTTCCGGCTACTGCCTTATTATTCTCCGATCTTCCTTTTCTTCAATAGACGCTGAAGCAAATAATCCGCACTTTGATCTCCGAGATGGAAATTCGGTGGTTCTTTCTATTAATTCTCTACAGCTCACCACTACTGATATTGCTAGTGCTGCTAGCAATAACAGTAGCATCGGTTCACCAGAATTGGTGATCACAGCTGATATTAGTAGTATGATGGAACAACTCCAGACATTTGTAACGGAGCTTCGGCGCAAAAATTCAAATTTCATTCAAATGGTCTTGGAGTATGGAAAAAAATATGTTGAGGAATACTCTGAATTGGTGGTAACCGACCCTAACTTCATGATGGATGCACTGAAGCCAGAAACCATCAAAGGCCTCGAGGAAACAGCAACAGCAAAGGTTATGATGAGTTCTGGATTTGAGAAAGATTTTTCCGATGTGCACATCAATTGCCGTAGGGAATGCTTAAAAGAGTGCCTATTGCATAGGTTATTTGGGATACAGAAGCTCAGCATCGAGGGCGTTCGCAATATGCGATGGAATGTCCTCGAAGCCCAACTTGAGAAATGGATTAAAACTTATGATTCTGATTCTTTAGATTCACCTCATTTGCTTATTCAATCCCTCAGAAAGCTCAAAACAATAGCCTCCGAGAGCGAAACAAATCGACGGTGTATCGAATCTGCCGGTGCTGTGGAGTTCTTAGCATCAATAGTAACAAAAAACAACACAAGCTGTTCAATAACAGAATTAACGGAAACTACCATTCTCGATGATGATGGTGATATGGAAGGTTTTACCTTTGACTTTAATATTGGTGCAGAAGATAAAGCAGTAAACATCCTTTACAATCTTCATTTAACAGATCAAGGTTTGAAAACTCTCTTGAACTTCAAAAATGGAGAATTTTTAGAATCATTAATTAGATTATTGCAAAAGGGTAGCTACGATTCAAGAACGTACGCCGTTTTTCTGTTGAAATCTATGTCAAAGATTGCTGATCCATCAAAACTAGCCAATCTAAAAACTGAGTTTTTCGTCGAACTAGTTCAGCTTCTTAAAGATCAGATATCAAAAAAAGCATCAAATGCCACACTACAAACGTTAATTCAACTCGTTAAATTTGGGAGAAATAGAATGAGAGCAGTGGAATCAGGCTGTGTTCAAGTTTTGATAGAACTTCTTTTTGATTGTAAAGAAAGGAAGCCATGTGAGATGATTTTGGTGCTTTTGGAGATGTTATGTCAATGTGCTGATGGAAGAGCTGAGCTTTTAAGCCATGGATGTGGTTTACCTATTGTTTCAAAGAAGATTTTGAGGATTTCAACAATGGCTACTGATAGAGCAATGAGAATTCTTCTATCTGTTGCAAGATTTTCTGCAACACATATAGTTGTTCAAGAAATGCTGGAAATAGGTGTTGTTGCAAAGCTTTGTTTGGTTCTTCAAGTTGATAGTGGAAATAAGGTTAAGGAGAAAGCAAGGGAGATTCTTAAATTGCATGCAAAGTGTTGGAGGAATTCTCATTGTGTACCTACTCAATTGCTTGCTTCTTATCCATCATCAAGTGCTTGA 1962 0.3884 MTHILTQIWGWVVQPEVWRFVGFASAVVGLVCYALSSSFNYLFGDWNLLKIFLYCVFSFIISLMIFFAKLLQHSTSLRFKAHTAFLVLAITSAYSFFFDKVVNGKPDLYSLISYAAFAIMSLSLSRQTPSGYCLIILRSSFSSIDAEANNPHFDLRDGNSVVLSINSLQLTTTDIASAASNNSSIGSPELVITADISSMMEQLQTFVTELRRKNSNFIQMVLEYGKKYVEEYSELVVTDPNFMMDALKPETIKGLEETATAKVMMSSGFEKDFSDVHINCRRECLKECLLHRLFGIQKLSIEGVRNMRWNVLEAQLEKWIKTYDSDSLDSPHLLIQSLRKLKTIASESETNRRCIESAGAVEFLASIVTKNNTSCSITELTETTILDDDGDMEGFTFDFNIGAEDKAVNILYNLHLTDQGLKTLLNFKNGEFLESLIRLLQKGSYDSRTYAVFLLKSMSKIADPSKLANLKTEFFVELVQLLKDQISKKASNATLQTLIQLVKFGRNRMRAVESGCVQVLIELLFDCKERKPCEMILVLLEMLCQCADGRAELLSHGCGLPIVSKKILRISTMATDRAMRILLSVARFSATHIVVQEMLEIGVVAKLCLVLQVDSGNKVKEKAREILKLHAKCWRNSHCVPTQLLASYPSSSA 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi971g00012 653 SUPERFAMILY ARM repeat 330 631 IPR016024 -
Vivi971g00012 653 Gene3D Exocyst complex component Exo70 188 321 - -
Vivi971g00012 653 Gene3D - 322 638 IPR011989 -
Vivi971g00012 653 PANTHER WDSAM1 PROTEIN 332 641 IPR045185 GO:0061630
Vivi971g00012 653 SUPERFAMILY Cullin repeat-like 189 325 IPR016159 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi971g00012 270 650 U-box Gene Family AT3G52450 42.784 4.56e-95 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi971g00012 - - vvo:131638475 1249.96