Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi969g00004 ATGAAAAATATGGATTTCTCATTCACACTATTTCTTCTAGTATTGATCTTTTCATTCCAATCTTCATCTTCTTCTTCATCATCATCCTTGAGAAAAGGTTCATCCATCTCAGTAGAAAATCCAGAAGACAAAATCATCTCACCAAATGGCATGTTCACTGCTGGCTTTACTTCCATTGGTGAAAATGCCTACTCCTTTGCCATATGGTTCACAGAACCAAATTCCCTCAAACTCAACAACACAATCATTTGGACGGCGAATCGAGACCAACCGGTTAACGGAAAACGATCCAAACTCACCCTTTTAAACACAGGAAACATTGTTCTTCTTGATGTTTCTCTAAACAATGTTTGGTCTTCAAACACTGCATCATTGAAACCATTAGAGTTGCATCTCAAAAACGATGGAAATCTTGTGTTGCGTGAGCTGCAAGGAACCGAAATTCTCTGGCAGAGTTTTGATTCTCCAACAGATACTCTCCTTCCTGGTCAACCTCTCACAAGATATACAAAGCTTGTTGCTGCAATAAGTGAGACTAATCATTCATCTGGCTTCTACATGTCGTTTTTCGACGATGAAAATATTTTCGGCCTTCATTACAACGGCCGCGATGTTTCTAGCTCGTATTGGCCAAGACCTTGGCTTCTGAGTTGGGATGTTGGCAGATCAAATTTCAACAGTAGCAGAACTGCAGTGTTGGACTCTCTTGGTAACTTCCATTCTTCTGATAATTTCACTTTTTCGACTTCTGATTATGGATCTGTGCTGCAAAGAATAATGAAACTTGACTCTGATGGTATGGTGAGAGTTTATAGCAGAAATAATGTGTCAAAGAATTGGTATGTTTCGTGGCAAGCCTTTTCTGGTACTTGTTTGGTTCATGGAATTTGTGGAGCTAATAGTACATGTAGTTATAGTCCTGAGTATGGAAGAAAGTGCTCTTGTATTCCAGGGTATAAGATGAGGAATCATAATGATTGGTCTTATGGTTGTGAACCTATGTTTGATTTCACTTGCAATAAAAGTGAGTCAACCTTTTTAGAGATGAAGAATGTTGAGTTTTATGGTTATGATTTTCATTATATTGAAATTTGTAACTATAGTACTTGTGAGGATTTATGCATACAAGATTGTAATTGTGTTGCATTTCAACATTCTTTTTGGGAGAAAAAGGGGTTTTATAGGTGTTTTACAAAAACACAATTGCAAAATGGAAGGTTTGTACCTTCTTTTGAAGGATCAACCTACTTGAGATTACCTAAAGGTAATAGCTTCTCTAAAGGAGAATCTTCGACTCCGAGTAATCATCTTTGTTTAGAAAAACTTGAAAGAGTTTATGTCAAAGAAAGCGAAAACCATTACGTAAAGTTTTTTCTCTGGTTCGTCACTGTGATCGGAGCTTTTGAAGCGGTCTGCATTTTTTCCGTTTGGTGTTCTCTATTCAGGTCGCGCCAAAAGACTAATGCAGACCAACACCGTTACCACCTTGCCGAAATAGGGTTTAGAAAATTCAGTTACTTGGAGCTCAAGAAAGCAACAAAAGGGTTCAGTCAAGAGATCGGAAGAGGCGGGGGAGGCGTTGTATACAAAGGCGTATTATCTGATCAAAGACACGCCGCGATAAAGAGACTTTACAATGCTCAACAAGGAGAAAGTGAGTTTCTCGCCGAAGTAGGCATCATTGGAAGACTTAATCACATGAACTTGATTGAAATGTGGGGATATTGCGCCGAGGGAAAATATAGACTATTGGTTTATGAGTACATGGAAAACGGTTCTTTAGCCGAAAATCTATCATCTAATAAACTTGATTGGAGTAAAAGATACAAAATTGCTTTAGCAATAGCAAGAGTTTTAGCATATCTACATGAAGAATGTTTGGAGTGGATTTTACATTGTGATATAAAGCCACAAAACATACTTCTTGATTCTAACTTCCAACCCAAGTTAGCGGATTTCGGATTGTCTAAGCTACAAAATAGAAACAATCTCAACAACTTAAGCGTCTCTACGATTCGAGGAACAAGAGGTTACATGGCACCTGAATGGATTTTCAACTTGCCAATAACATCTAAAGTTGATGTTTATAGCTATGGAATTGTTGTGTTGGAGATGATAACAGGTAAGAGTCCGACAACAGGTTTCAAAGTATTGAATGGTGAAAAGGAAAGTGTTGGGAGGTTGGTTACTTGGGTGAGAGATAAAAAAGGGAGTAGTGTTGGTTGGTTGGAGGAAATTGTTGATGATGAAATTGGATTAGGTTATGATAAAAGTAAGATGGAGATGTTGGCTAAAGTTGCTTTGGATTGTGTTGTGGATGAAAGAGATTCAAGGCCTACTATGAGTAGAGTTGTTGAGATGCTTCAATACCATGGAACTGATGGTCAGTGA 2391 0.3806 MKNMDFSFTLFLLVLIFSFQSSSSSSSSSLRKGSSISVENPEDKIISPNGMFTAGFTSIGENAYSFAIWFTEPNSLKLNNTIIWTANRDQPVNGKRSKLTLLNTGNIVLLDVSLNNVWSSNTASLKPLELHLKNDGNLVLRELQGTEILWQSFDSPTDTLLPGQPLTRYTKLVAAISETNHSSGFYMSFFDDENIFGLHYNGRDVSSSYWPRPWLLSWDVGRSNFNSSRTAVLDSLGNFHSSDNFTFSTSDYGSVLQRIMKLDSDGMVRVYSRNNVSKNWYVSWQAFSGTCLVHGICGANSTCSYSPEYGRKCSCIPGYKMRNHNDWSYGCEPMFDFTCNKSESTFLEMKNVEFYGYDFHYIEICNYSTCEDLCIQDCNCVAFQHSFWEKKGFYRCFTKTQLQNGRFVPSFEGSTYLRLPKGNSFSKGESSTPSNHLCLEKLERVYVKESENHYVKFFLWFVTVIGAFEAVCIFSVWCSLFRSRQKTNADQHRYHLAEIGFRKFSYLELKKATKGFSQEIGRGGGGVVYKGVLSDQRHAAIKRLYNAQQGESEFLAEVGIIGRLNHMNLIEMWGYCAEGKYRLLVYEYMENGSLAENLSSNKLDWSKRYKIALAIARVLAYLHEECLEWILHCDIKPQNILLDSNFQPKLADFGLSKLQNRNNLNNLSVSTIRGTRGYMAPEWIFNLPITSKVDVYSYGIVVLEMITGKSPTTGFKVLNGEKESVGRLVTWVRDKKGSSVGWLEEIVDDEIGLGYDKSKMEMLAKVALDCVVDERDSRPTMSRVVEMLQYHGTDGQ 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi969g00004 796 SMART serkin_6 514 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi969g00004 796 SMART blect_4 27 156 IPR001480 -
Vivi969g00004 796 Gene3D Phosphorylase Kinase; domain 1 477 588 - -
Vivi969g00004 796 Pfam Protein kinase domain 517 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi969g00004 796 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672|GO:0006468
Vivi969g00004 796 CDD STKc_IRAK 533 789 - -
Vivi969g00004 796 PANTHER OS07G0415500 PROTEIN 8 790 - -
Vivi969g00004 796 ProSiteProfiles Protein kinase domain profile. 514 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi969g00004 796 ProSiteProfiles PAN/Apple domain profile. 339 420 IPR003609 -
Vivi969g00004 796 FunFam Putative receptor-like protein kinase 589 794 - -
Vivi969g00004 796 Pfam S-locus glycoprotein domain 241 322 IPR000858 GO:0048544
Vivi969g00004 796 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 173 IPR036426 -
Vivi969g00004 796 ProSitePatterns Protein kinases ATP-binding region signature. 520 542 IPR017441 GO:0005524
Vivi969g00004 796 ProSiteProfiles Bulb-type lectin domain profile. 21 153 IPR001480 -
Vivi969g00004 796 SUPERFAMILY Protein kinase-like (PK-like) 492 790 IPR011009 -
Vivi969g00004 796 PIRSF SRK 1 794 IPR024171 GO:0004674
Vivi969g00004 796 Gene3D - 22 154 IPR036426 -
Vivi969g00004 796 FunFam S-receptor-like serine/threonine-protein kinase 483 588 - -
Vivi969g00004 796 Pfam D-mannose binding lectin 81 168 IPR001480 -
Vivi969g00004 796 Gene3D Transferase(Phosphotransferase) domain 1 589 794 - -
Vivi969g00004 796 CDD B_lectin 47 156 IPR001480 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi969g00004 504 788 Trihelix Transcription Factor Family AT5G38560 41.980 5.63e-64 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vivi969g00004 Pkinase 5.1e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi969g00004 - - mtr:11433991 1328.15