Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi969g00003 ATGGCTTATAAAACTTCATATATTTTCCTAGCCTTGTTATTTCGTTTTCAATGTTCATGTTCTTTATCATCATTGAATAAGGGATCTTATCTCTCAGTTGAGAAACATACAGAAGATGTACTTGTTTCTTCAAATGGTTTATTCTCTGCTGGATTCTATCAAGTTGGAGAGAACGCATTTTCCTTTGCCATATGGTTCACAGAGCTGCACAATCACAATCCTAACAATATTGTTTGGATGGCAAACCGTGAACAGCCTGTCAATGGTAAACATTCAAAGCTTTTCCTCTTAAGCACAGGAAATATCCTATTGCTTGATGCAGGTCAACTCAACACTTGGTCTTCAAACACGGCTTCAAATACTCCATTAGAGTTGTATCTCAAAGAGGATGGTAATCTTGTGTTACGCGAGCTTCAAGGAACTACCATTTTGTGGCAAAGCTATGATTTCCCAACAAATACTCTCCTTCCAAATCAACCTCTCACTAGATACACTAAACTTGTTTCCTCAAGAAGCTATAGTAATCATTCTTCTGGCTTCTATAAGTTATTCTTTGACGATAATAATATTATTCGTCTCGACTATGATGGTCCTGATGTTTCAAGCACATATTGGCCACCAGCTTGGATGTCAAATTGGGAAGCTGGAAGATCTAATTACAATAGTAGTAGAACTGCTTTGATAGATTCTCTTGGAAAGTTTATTTCATCAGATAATTACTTTTTTTCCACATATGATTATGGTACGGTTCTGCAAAGAAGAATAGTGATGGATTCTGATGGTAATATTCGAGTTTACAGTCGAAAAAACTTGTCAGAAAATTGGTATGTTTCATGGCAAGTAATATCTAATACTTGCATCATTCATGGAGTTTGTGGTGCAAATAGCACTTGTAGCTATGATCCTAAAAAGGGTAAGAAATGCTCTTGTTTGCCAGGATTTAAAGTGAAGAGCTACAATGATTGGTCCTATGGTTGTGAACCTATGTTTGATTTTACATGCAAAAGAAATGAGTCTACCTTTTTAAAATTACAAGGTTTTGAGCTATATGGCTATGATGGTAATTTTGTTAAAAATATTACCTACAAAGATTGTGAGAATTTGTGTTTACAACAATGTAACTGTACAGGATTCCAATACACATATGAAGATGGCGGTAACATCTTCAAATGCTACACAAAGCTACAACTGCTGAATGGGAGACATTCACCAAGTTTTCCAGGAACAACTTACTTGAGACTTCCAAAAGGTAAGAACTTCTCAAAACAAGAGTTTGTGAGTGTAAAAGATCATGTTTGTTTGGTGCAGCTTTTCAAAAACTATGTCAAAAAACCAACAAACAATTTGGTGAGGTTTTTTCTGTGGACATCAATTGCAGCTGGTGGTTTAGAATTTGTTCTCTTTGTTGTGGTTTGGGTTTGTTTAAATAAAACCAAGAAAAAGTCTAGTGCAAATCAAAATGGCTTTGATCATGCATTTTTGGGATTTAGAAGATATAGTTACTCTGAGTTGAAGGTAGCTACAAAGAATTTTAGCAATGAGATTGGAAGAGGTGGAGGAGGGGTTGTCTATAGAGGTACATTGCCAGATCAAAGAGATGTTGCAATAAAGAGATTGAATGAAGCTAAACAAGGAGAAGGAGAGTTTCAAGCTGAGGTAAGCATCATCGGAAGGCTTAATCATATGAACTTGATTGAAATGTGGGGATATTGTGTTGAAGGTAAGCATAGAATTTTGATATATGAGCACATGGAAAATGGTTCTTTAGGTGAAAATCTTTCATCTAAGACAAACATACTTGATTGGAGTAAAAGGTATGATATTGCTTTAGGAATATCTAAAGTTCTAGCTTATCTACATGAAGAATGTTTAGAGTGGATTTTACATTGTGATATAAAGCCACAAAATATACTTCTTGATTCTAACTTTCAGCCCAAGTTAGCAGATTTTGGATTGTCTAAGCTAAAAAATAGAAACAATCTCGATAACAATTCAACATTCTCAATGATTAGAGGAACAAGAGGCTACATGGCTCCTGAATGGATTTTCAATTTACCAATAACATCTAAAGTAGATGTTTATAGTTATGGGGTTGTTGTGTTGGAGATGATAACTGGAAAGAATCCAACAATGATGAATATAGAAGGAGACGGTGGAGAAATGGCATATAATGGAAGTTTGATAAGTTGGGTAAGAGAGAAAAAGAGGAGTGCATGTTGGGTGAAAGAAATTTTGGATCCTGCAATAGGGACAAGTTGTGATTTAAGTAAGATGGAAACTTTGGCTAGAGTTGCCTTGGACTGTGTAGAGGAAGATAAGGATATTAGGCCTAATATGAGCCAGGTGGTTGAGATGCTTCAAAATAATGAAAGAGTTGTTGAGTGA 2385 0.3543 MAYKTSYIFLALLFRFQCSCSLSSLNKGSYLSVEKHTEDVLVSSNGLFSAGFYQVGENAFSFAIWFTELHNHNPNNIVWMANREQPVNGKHSKLFLLSTGNILLLDAGQLNTWSSNTASNTPLELYLKEDGNLVLRELQGTTILWQSYDFPTNTLLPNQPLTRYTKLVSSRSYSNHSSGFYKLFFDDNNIIRLDYDGPDVSSTYWPPAWMSNWEAGRSNYNSSRTALIDSLGKFISSDNYFFSTYDYGTVLQRRIVMDSDGNIRVYSRKNLSENWYVSWQVISNTCIIHGVCGANSTCSYDPKKGKKCSCLPGFKVKSYNDWSYGCEPMFDFTCKRNESTFLKLQGFELYGYDGNFVKNITYKDCENLCLQQCNCTGFQYTYEDGGNIFKCYTKLQLLNGRHSPSFPGTTYLRLPKGKNFSKQEFVSVKDHVCLVQLFKNYVKKPTNNLVRFFLWTSIAAGGLEFVLFVVVWVCLNKTKKKSSANQNGFDHAFLGFRRYSYSELKVATKNFSNEIGRGGGGVVYRGTLPDQRDVAIKRLNEAKQGEGEFQAEVSIIGRLNHMNLIEMWGYCVEGKHRILIYEHMENGSLGENLSSKTNILDWSKRYDIALGISKVLAYLHEECLEWILHCDIKPQNILLDSNFQPKLADFGLSKLKNRNNLDNNSTFSMIRGTRGYMAPEWIFNLPITSKVDVYSYGVVVLEMITGKNPTMMNIEGDGGEMAYNGSLISWVREKKRSACWVKEILDPAIGTSCDLSKMETLARVALDCVEEDKDIRPNMSQVVEMLQNNERVVE 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi969g00003 794 CDD STKc_IRAK 527 788 - -
Vivi969g00003 794 ProSiteProfiles Protein kinase domain profile. 509 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi969g00003 794 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
Vivi969g00003 794 Gene3D Phosphorylase Kinase; domain 1 471 583 - -
Vivi969g00003 794 SMART blect_4 32 151 IPR001480 -
Vivi969g00003 794 Pfam S-locus glycoprotein domain 242 317 IPR000858 GO:0048544
Vivi969g00003 794 Pfam PAN-like domain 334 395 IPR003609 -
Vivi969g00003 794 CDD B_lectin 41 151 IPR001480 -
Vivi969g00003 794 SMART serkin_6 509 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi969g00003 794 ProSiteProfiles PAN/Apple domain profile. 334 415 IPR003609 -
Vivi969g00003 794 CDD PAN_AP_plant 333 415 - -
Vivi969g00003 794 FunFam Putative receptor protein kinase ZmPK1 19 150 - -
Vivi969g00003 794 Gene3D Transferase(Phosphotransferase) domain 1 584 793 - -
Vivi969g00003 794 Pfam D-mannose binding lectin 77 164 IPR001480 -
Vivi969g00003 794 SUPERFAMILY Protein kinase-like (PK-like) 490 786 IPR011009 -
Vivi969g00003 794 PANTHER OS07G0415500 PROTEIN 10 789 - -
Vivi969g00003 794 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 169 IPR036426 -
Vivi969g00003 794 FunFam S-receptor-like serine/threonine-protein kinase 477 583 - -
Vivi969g00003 794 PIRSF SRK 1 794 IPR024171 GO:0004674
Vivi969g00003 794 ProSitePatterns Protein kinases ATP-binding region signature. 515 537 IPR017441 GO:0005524
Vivi969g00003 794 SMART ntp_6 336 414 IPR003609 -
Vivi969g00003 794 Gene3D - 22 149 IPR036426 -
Vivi969g00003 794 ProSiteProfiles Bulb-type lectin domain profile. 16 148 IPR001480 -
Vivi969g00003 794 Pfam Protein kinase domain 512 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi969g00003 794 FunFam Putative receptor-like protein kinase 584 794 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi969g00003 466 787 Receptor kinase-like Gene Family AT5G45780 36.890 3.60e-62 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vivi969g00003 Pkinase 1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi969g00003 - - gmx:100784823 1128.24