Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi969g00001 ATGAGTTGCTTTTCATGTTTTTCCAACCAAGAAAAGAAAGTACCAAGGAGGCCTAATAACAACAACAATAACAATGGAAAGAGGATACAATATGCTCCTACTCAAATATCTCCTAAAAAAGCACCTCAACCTAACCATCATCATCATCATCAAGAGAATCATAACTATAAGGCTAGGACAAGCCCACAAAGAGAACCTAGAATAAATAAAGAGGCTAACAAAGAAAATGGTGGTGGTAACAACATTGCTGCACAATCATTCACATTCAGGGAATTGGCTTCTATCACAAGGAACTTTAGGCAAGAAAATCTAATAGGTGAAGGTGGGTTTGGAAGAGTTTATAGAGGAAGACTTGAAAAAACAAACCAGGAAGTAGCTGTGAAGCAACTTGACAGGAATGGACTACAAGGAAATAGGGAGTTTCTTGTTGAAGTTTTGATGCTAAGCCTCTTACACCATCATAATCTAGTGAGTCTAATTGGATATTGTGCTGATGGAGAGCAAAGACTATTGGTATATGAGTACATGCCATTAGGATCTCTTGAAGATCATCTACTTGATCTTCCACGAAGACAAAAGCCATTAGAATGGTTCAAAAGAATGAAAGTAGCACTGGATGCTGCAAAAGGTTTAGAGTATTTGCATGATAGAGCGAATCCACCCGTGATATACCGCGACTTAAAATCCTCCAACATTTTACTAGACAATGGTTTTAATGCAAAACTATCTGATTTTGGATTAGCTAAACTTGGACCTACAGGTGACAAGTCTCATGTTTCTTCAAGAGTGATGGGAACTTATGGATACTGTGCTCCTGAGTATCAAAGAACTGGTCAACTCACTGTTAAATCAGATATATACAGTTTTGGTGTTGTTTTGCTTGAATTGATTACTGGTAGGAGAACTATTGATAACACAAGACCTTTAAGGGAGCAAAATCTTGTTACTTGGGCGTATCCAGTATTCAGGGAACCAGCAAGGTATTCAGAATTGGCAGATCCAAAACTTGAAGGAAGCTTTCCGATGAGATCGTTACATCAAGCAGTGGCAGTAGCCGCAATGTGTCTAAACGAAGAACCATCAGTGAGACCATTGATAAGTGATGTTGTAACAGCTCTTAGTTTCCTTAATCCAATGAACCAAGATCAACAAGTTTTGTCACCAATTGATATGCCATCACCAACAGAAGAAAATAGCGCAACGTTGAGTCTTCTTGACGACGACAGTGCTGTCGAACGACAAAGAGCCGTTGATGAAGCCATTGAATGGGGCTCAAATACTAGGAATAAACCAAGGCTTGACAGTGCTTCATCTATTTAA 1320 0.3894 MSCFSCFSNQEKKVPRRPNNNNNNNGKRIQYAPTQISPKKAPQPNHHHHHQENHNYKARTSPQREPRINKEANKENGGGNNIAAQSFTFRELASITRNFRQENLIGEGGFGRVYRGRLEKTNQEVAVKQLDRNGLQGNREFLVEVLMLSLLHHHNLVSLIGYCADGEQRLLVYEYMPLGSLEDHLLDLPRRQKPLEWFKRMKVALDAAKGLEYLHDRANPPVIYRDLKSSNILLDNGFNAKLSDFGLAKLGPTGDKSHVSSRVMGTYGYCAPEYQRTGQLTVKSDIYSFGVVLLELITGRRTIDNTRPLREQNLVTWAYPVFREPARYSELADPKLEGSFPMRSLHQAVAVAAMCLNEEPSVRPLISDVVTALSFLNPMNQDQQVLSPIDMPSPTEENSATLSLLDDDSAVERQRAVDEAIEWGSNTRNKPRLDSASSI 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi969g00001 439 Gene3D Transferase(Phosphotransferase) domain 1 176 390 - -
Vivi969g00001 439 CDD STKc_IRAK 105 373 - -
Vivi969g00001 439 PANTHER OS07G0668900 PROTEIN 3 383 - -
Vivi969g00001 439 MobiDBLite consensus disorder prediction 55 72 - -
Vivi969g00001 439 SUPERFAMILY Protein kinase-like (PK-like) 85 402 IPR011009 -
Vivi969g00001 439 ProSitePatterns Protein kinases ATP-binding region signature. 105 128 IPR017441 GO:0005524
Vivi969g00001 439 SMART serkin_6 99 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi969g00001 439 MobiDBLite consensus disorder prediction 1 41 - -
Vivi969g00001 439 MobiDBLite consensus disorder prediction 416 439 - -
Vivi969g00001 439 Pfam Protein kinase domain 100 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi969g00001 439 Gene3D Phosphorylase Kinase; domain 1 83 175 - -
Vivi969g00001 439 MobiDBLite consensus disorder prediction 1 82 - -
Vivi969g00001 439 ProSiteProfiles Protein kinase domain profile. 99 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi969g00001 439 FunFam Serine/threonine-protein kinase PBS1 70 175 - -
Vivi969g00001 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Vivi969g00001 439 FunFam Serine/threonine-protein kinase PBS1 176 389 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi969g00001 1 437 Glycoside Hydrolase AT3G07070 63.864 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Vivi969g00001 Pkinase 7.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi969g00001 - - psat:127127708 749.969