Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi968g00026 ATGAAGAAACAATGGTGTGAGATTGAGGCAATAGGCATTAACTATAAGATCCATAGCACAAAGACAATAAAACAGCCTTTTAAAATCTTCAACAAACCTCTAAAACCAGACGATGAAGCAAACGCCAGAGAAATGCCGGGTAGTGGAGTTAAGCATGTTCTCAAGGATGTTAATTGCATGGCCAAGCCATGTGAAATTCTTGCGATTGTTGGGCCAAGTGGAGCAGGAAAATCATCACTGCTGGAGATTCTTGCTGGTAGAGTTAGTCCACAGAATGGAGGTTCTATCTTGGTGAACCAGGAGCATGTAGATAAATCTCAGTTCAGAAAATTTTCAGGGTATGTTACACAAAAGGATACCCTTTTCCCCTTGCTTACGGTTGAAGAAACCATGATGTTTAGTGCAAAACTAAGGCTGAATCTTCCTCAAGAAAAACTATGCTCCAAGGTTAAGTCACTGATTCAAGAGCTTGGTCTTAGCCATGTTGCTAGGACTAGAGTAGGAGATGGAGATGATAGAATCCGCGGAATATCCGGTGGCGAGAGGCGCCGAGTTTCCATTGGTGTTGAAGTCATACATGATCCGAAAGTGTTGATTCTTGATGAAGCAACTTCGGGTCTTGACAGTACCTCAGCTTTGCAAATAATTGATATGCTGAAAGTCATGGCTGAATCTAGGGGGAGAACTATAATACTTAGTATTCATCAACCCGGGTTCAGGATAGTGAAGTTGTTCAATTCAATACTGTTGTTAGACAATGGCAGTGTGTTGCATCATGGGAGTGTGGATTTGTTGGATGTGAATCTGAGGTTGATGGGTTTAGAGCTTCCTCTTCATGTTAATGTTGTTGAGTTTGCTATTGAATCCATTGAGACTATTCAGCAACATCAACAAAGTCTGCAAGTTCAGACCGGAGCGCCGAAACGGGTACTCGGGTCGATGATACTAAAGAAAGGAGATGATCAAGGTGAAAGCAGAAGTGGTAAGTTAACTCTACTACAGCTATTTCAACAATCCAAGGTATTTGACATCGAAACCATCAATGTCGGAATGGATTTCACTTGTGATTATGCTAATTCTAGATTGAGAGAAACAATGATTCTTGCTCATAGATTCTCCAAAAACATTCTACGTACGAATGAGCTCTTTGCATTTAAGACAGTTCAGATGCTAATTTCTGGTCTGGTTTTAGGCTCCATATTTGGTAATCTCAAAGATGGTTTAGTGGGAGCAGAACAGAGAGTTGGTTTATTTGCTTTCATATTAACGTTTTTGTTATCAAGCACCATTGATGCTCTACCAATTTTCCTACAAGAAAGGGAGATTCTAATGAAGGAGACATCAAGTGGAAGCTACAGAGTTTCATCCTATGCTTTAGCCAATGGCCTAGTTTACTTGCCATTTCTACTCATACTAGCCATTTTATTCGCAGTGCCGCTGTACTGGATTGTCGGTCTCAACCAAAACTTCACGGCGTTTTTGCACTTTCTGTTGCTAATCTGGCTGATTCTGTATACTGCAAATTCGGTTGTGGTATGTTTCAGTGCTCTGGTGCCTAATTTCATTGTTGGAAATTCAGTAATTGCCGGTGTCATTGGTTCGTCTTTTTTGTTTTCTGGTTACTTCATATCCAATCATGAAATTCCAAAGTACTGGATTTTCATGCATTATTTATCTCTATTTAAGTATCCCTTTGAAGGGTTTCTAATAAATGAGTTCACCAACTCAAAGAAATGCTTAGAGTACATGTTTGGGGCATGTGTGATGAAGGGAGAGGATATACTCAAAGAAGAAGGGTATGGAGGAGAGAGTAGTAGATGGAAGAATGTTGGGGTGATGGTGTCCTTTATCTTTGCTTATAGATTCATTTCTTATATAATTCTCAGATACAGATGTTCCCAGCGTGTCATCTTCTGA 1917 0.4006 MKKQWCEIEAIGINYKIHSTKTIKQPFKIFNKPLKPDDEANAREMPGSGVKHVLKDVNCMAKPCEILAIVGPSGAGKSSLLEILAGRVSPQNGGSILVNQEHVDKSQFRKFSGYVTQKDTLFPLLTVEETMMFSAKLRLNLPQEKLCSKVKSLIQELGLSHVARTRVGDGDDRIRGISGGERRRVSIGVEVIHDPKVLILDEATSGLDSTSALQIIDMLKVMAESRGRTIILSIHQPGFRIVKLFNSILLLDNGSVLHHGSVDLLDVNLRLMGLELPLHVNVVEFAIESIETIQQHQQSLQVQTGAPKRVLGSMILKKGDDQGESRSGKLTLLQLFQQSKVFDIETINVGMDFTCDYANSRLRETMILAHRFSKNILRTNELFAFKTVQMLISGLVLGSIFGNLKDGLVGAEQRVGLFAFILTFLLSSTIDALPIFLQEREILMKETSSGSYRVSSYALANGLVYLPFLLILAILFAVPLYWIVGLNQNFTAFLHFLLLIWLILYTANSVVVCFSALVPNFIVGNSVIAGVIGSSFLFSGYFISNHEIPKYWIFMHYLSLFKYPFEGFLINEFTNSKKCLEYMFGACVMKGEDILKEEGYGGESSRWKNVGVMVSFIFAYRFISYIILRYRCSQRVIF 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi968g00026 638 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 264 IPR027417 -
Vivi968g00026 638 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 13 623 - -
Vivi968g00026 638 ProSitePatterns ABC transporters family signature. 177 191 IPR017871 GO:0005524|GO:0016887
Vivi968g00026 638 Pfam ABC-2 type transporter 365 573 IPR013525 GO:0016020|GO:0140359
Vivi968g00026 638 SMART AAA_5 63 255 IPR003593 GO:0016887
Vivi968g00026 638 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 34 278 IPR003439 GO:0005524
Vivi968g00026 638 FunFam ABC transporter G family member 5 39 302 - -
Vivi968g00026 638 Gene3D - 43 308 IPR027417 -
Vivi968g00026 638 Pfam ABC transporter 54 205 IPR003439 GO:0005524
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi968g00026 59 325 Calmodulin-binding Proteins AT2G36910 23.810 1.41e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi968g00026 K05681 - gmx:121172640 950.273