Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi968g00025 ATGATAGTCAAAATATATCATCAAATGGGAGATATTGTCAAGCTTCCTCCTGGCTTTGTTTTCTCTCCAACAGATGAAGAACTTATCATCCACTTTCTATATTCCAAGGCTTCTGATCTTATACCATCCCACTCAAACTTCATCCCTCATCTAGATCTCTCTCTATTTCTTCCTTGGGAATTAAATGGTAAGGCTATGTGTGGTGGAAATGATGAAGACCAATACTATTTCTTCACAAAACTGAACAAGGAAAACAGATCCACTAAAAATGGTTTTTGGAAGGAAATTGGTGTGTCCGAACCAATATTTTCAGCTACTGATCAAAAAGTGGGAATGAAAAACTACCTAGTATTCAACATTTCACAAGGTGCTGAAACTAGTTGGGTAATGCAAGAATATCACATTTCCTCCAATGTGTTTGATAAAGTTGGTGAAAATTGGAGCGAGTGGGTATTATGCAAAGTGTATGAAGTTGAAAAGAACATGTATCCTGAACAAGGTTACAGCGATGATGACCGTGAGAGTAGTGGAACAGAACTTTCATGGCAAGACCAAGTTTTTCTGTCTTTAGACTTGGACATTGACATGGAAGGAGGAATAACCATGAATCAATATTAG 618 0.3722 MIVKIYHQMGDIVKLPPGFVFSPTDEELIIHFLYSKASDLIPSHSNFIPHLDLSLFLPWELNGKAMCGGNDEDQYYFFTKLNKENRSTKNGFWKEIGVSEPIFSATDQKVGMKNYLVFNISQGAETSWVMQEYHISSNVFDKVGENWSEWVLCKVYEVEKNMYPEQGYSDDDRESSGTELSWQDQVFLSLDLDIDMEGGITMNQY 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi968g00025 205 Pfam No apical meristem (NAM) protein 16 135 IPR003441 GO:0003677|GO:0006355
Vivi968g00025 205 Gene3D NAC domain 24 162 IPR036093 GO:0003677|GO:0006355
Vivi968g00025 205 PANTHER NAC TRANSCRIPTION FACTOR 56 15 162 - -
Vivi968g00025 205 SUPERFAMILY NAC domain 6 156 IPR036093 GO:0003677|GO:0006355
Vivi968g00025 205 ProSiteProfiles NAC domain profile. 15 158 IPR003441 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi968g00025 15 164 NAC Transcription Factor Family AT1G61110 35.465 2.08e-30 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vivi968g00025 NAM 1.9e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi968g00025 - - vvo:131638416 431.409