Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi968g00012 ATGCCCACGTGGTGGGGTAAAAAATCAACCAAGACCAAGGACCTTCTTCACCAAGAAGAGCCACGTGGCGGAAGCAGCAGTGGTGGAAGTAGCGGCGGCGGCGGCGTGCTTCATTTCAATTTTAATAAGTCTCCGATTAGAAACGCTGCCAATTATAAAAACGGTTATTATAAACCAGAAAACCCTAGGAGTTTTGAAGACGCTTCTAATTTTAGAAATTCTCCCAGATCTAGTAGAGATTTCACTCCTTCAACCACCACCACCACCGCTGCCGGTGGTTCTTCTTCCTTTTGGGATTCCGAAGCCGGTGATAAGATAGGGCATCCTTTGCCGCGTCCTTCTGTTTCTTCTACGCAAAGCTTGAGTAATGATCAGGGGATTACTTTTGGCTCTGCTTCTGTTTCTGGCTCTAGCGTTAGCTCCAATGGCTCTTGTGATGATCCTTTGGCTTTTAACTCCCAGATTAATAGCGTTAGGGGACAATGTGAAACAAAGTTCAATGTGAGGTCTAAAAGCCCTGGTCCTGGGTCAAGAGGACCTACCAGCCCGACATCACCTCTTCATCCAAGGTTGCATGTTTTGAGTCTTGACTCACCTACAGGCAGGCAAGAAGATGGAAGGAGTGAGTGTCATCCATTGCCTCTTCCTCCAGGATCTCCGACTAGTCCATCTTCAGCTCTTCCGAACAACGCGAGACCAAATGGAATGGTAGAAAATTGTGCCACTAACCGTGGCAGGTGGAAGAAAGGAAAGCTTCTAGGTCGGGGAACATTTGGGCATGTTTACTTGGGATTCAATAGTGAAAGCGGACAATTGTGTGCAATAAAAGAAGTCAGGGCTGTATGTGATGATCCAACCTCAAAAGAGTGCCTCAAACAACTTAATCAGGAGATAACTTTGCTGAGTCAACTTTCACATCCAAACATTGTTCAATACTATGGAAGTGATTTGGGAGAAGAAACACTTTCCGTTTATTTGGAATACGTCTCTGGAGGTTCTATTCATAAATTACTTCAGGAATATGGGTCCTTCAAAGAGCCTGTCATCCAAAATTATACAAGGCAGATTGTCTCCGGACTTTCATATCTTCATGGGAGAAATACAGTGCACAGGGATATCAAAGGGGCTAACATACTAGTTGATCCTAATGGTGAAATCAAGCTGGCGGACTTTGGAATGGCTAAACATATAAATTCTTCATCCTCAATGCTTTCTTTCAAAGGAAGTCCACATTGGATGGCGCCAGAGGTTGTAATGAATACAAATGGCTATAGTCTTCCTGTTGATATTTGGAGCTTGGGATGCACAATTCTTGAAATGGCAACATCGAGGCCTCCTTGGAGTCAGTATGAAGGGGTAGCTGCAATATTTAAAATTGGCAACAGCAAAGACATGCCTGAAATTCCTGATCATCTCTCAAATGATGCAAAGAATTTCATTAAGCTATGCTTGCATAGAGATCCTGCAACTCGCCCTACAGCCCATATGTTACTTAATCACCCCTTTATTCGAGATCAGTCAGCAACAAAAGCTGCAAATGTCAGAATAACCAAGGATGCTTTTCCCTACATGTTCGATGGAAGCCGGACGCCGCCCGCTTCAGATCTTCATTCCAATAGAAATTGTATTGCTTCTCATGATGCAGACCATGCAACAAAGCCAGTTGTTGCATCTTCCCGAGCAATAAGGAGCCCAAGAGACAACACAAGAATGATCACATCCTTACCAGTATCTCCGTGTTCAAGTCCATTGCGACAGTCCGGTCCGGCACACAAGAGCTGTTTCCTTTCTCCTCCACATCCAAATTATTCTATGATGGGACATCATACCCTTGCTTCATATGAATCATATCCAATGAGATCAAATGCCAAGTTTACTCTTGATCCTTGGCAAGAAATACCTATGTACAAAGCCCACACACCTGGTGGATCCCCAAGGAGACTTATTTGA 1950 0.4415 MPTWWGKKSTKTKDLLHQEEPRGGSSSGGSSGGGGVLHFNFNKSPIRNAANYKNGYYKPENPRSFEDASNFRNSPRSSRDFTPSTTTTTAAGGSSSFWDSEAGDKIGHPLPRPSVSSTQSLSNDQGITFGSASVSGSSVSSNGSCDDPLAFNSQINSVRGQCETKFNVRSKSPGPGSRGPTSPTSPLHPRLHVLSLDSPTGRQEDGRSECHPLPLPPGSPTSPSSALPNNARPNGMVENCATNRGRWKKGKLLGRGTFGHVYLGFNSESGQLCAIKEVRAVCDDPTSKECLKQLNQEITLLSQLSHPNIVQYYGSDLGEETLSVYLEYVSGGSIHKLLQEYGSFKEPVIQNYTRQIVSGLSYLHGRNTVHRDIKGANILVDPNGEIKLADFGMAKHINSSSSMLSFKGSPHWMAPEVVMNTNGYSLPVDIWSLGCTILEMATSRPPWSQYEGVAAIFKIGNSKDMPEIPDHLSNDAKNFIKLCLHRDPATRPTAHMLLNHPFIRDQSATKAANVRITKDAFPYMFDGSRTPPASDLHSNRNCIASHDADHATKPVVASSRAIRSPRDNTRMITSLPVSPCSSPLRQSGPAHKSCFLSPPHPNYSMMGHHTLASYESYPMRSNAKFTLDPWQEIPMYKAHTPGGSPRRLI 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi968g00012 649 MobiDBLite consensus disorder prediction 112 127 - -
Vivi968g00012 649 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 91 511 - -
Vivi968g00012 649 MobiDBLite consensus disorder prediction 166 184 - -
Vivi968g00012 649 ProSitePatterns Protein kinases ATP-binding region signature. 253 276 IPR017441 GO:0005524
Vivi968g00012 649 MobiDBLite consensus disorder prediction 571 588 - -
Vivi968g00012 649 MobiDBLite consensus disorder prediction 166 235 - -
Vivi968g00012 649 ProSiteProfiles Protein kinase domain profile. 247 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi968g00012 649 Pfam Protein kinase domain 248 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi968g00012 649 SUPERFAMILY Protein kinase-like (PK-like) 244 576 IPR011009 -
Vivi968g00012 649 SMART serkin_6 247 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi968g00012 649 MobiDBLite consensus disorder prediction 1 127 - -
Vivi968g00012 649 MobiDBLite consensus disorder prediction 571 591 - -
Vivi968g00012 649 MobiDBLite consensus disorder prediction 66 96 - -
Vivi968g00012 649 FunFam Mitogen-activated protein kinase kinase kinase 245 527 - -
Vivi968g00012 649 CDD STKc_MEKK1_plant 246 503 - -
Vivi968g00012 649 Gene3D Transferase(Phosphotransferase) domain 1 244 525 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi968g00012 1 566 MAP Kinase Kinase Kinase AT1G53570 56.920 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Vivi968g00012 Pkinase 1.4e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi968g00012 K04421 - gmx:100813122 893.264