Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi968g00003 ATGGCCGAAACAAAATTGATTCCAGGGTTTCGGTTTCATCCCACTGATGTTGAGCTCGTTATGTATTTTCTCAAGAGGAAGATTACCGGTAGGAAGTTCCCTTTTGATGTCATTGCTGAACTTGACATTTACAAGTATGCTCCATGGGATCTCCCAGATAAATCTTTGCTCAAAAGTGGGGATTTGAAATGGTACTTCTTTAGCCCTGTAGGAAAGAAATATTGCACGGGAGGGAGGATGAATCGAGCGACTGAAATTGGGTACTGGAAGACTACAGGGAAGGATAGAGCAGTTGAACATGGGAATCAAGTGGTGGGGATGATTAGAACTCTGGTTTTTCACATTGGCAAAGCTCCTAAGGGAGACCGAACTGATTGGGTAATGCATGAATTCAGACTTGAGGACAAAGACTTAGCTGACAAAGGCATTGCACAGAATTCCTACGTGATTTGTAGGGTATTTCAAAAGGAGGGTCCTGGTCCAAGGAATGGTGCTCAGTATGGTAAACCATTTAATGAGAAAGACTGGGATAGTGAAGAGGAAATTGATTGTTTGCAATCTGTCCCTGCTGCTGCTATGTCTTTACCAGCTACAACTCTACCTAGCTCAAGCCATATTTCCGAAGAAAATGACATGCATCCCTCAACAAGTGGATGCATTGGACGGAACTCTTTATCATGTCTATCTAGATCAGTGCCCTCTGGCTTGCCACACCCTTCAGCTCCAAGCAATCAAATTGACGACGACATTTTATCCATGCTTGCTATTTTCAAAGATGATGAGGATACATTGGCAGGGAATGAAAACAACGGATCTGAGGTTGATAATCCTGGTCAGGCAAACAATGCGGAAGGCGAACCTTATTTAGACCCAAATGAGATTTTCGGGGACTTGGGAGATCTTGAAAGCTTGGTTGGATGGGATGATGGAGATGGCTTTTCCCATGACCAAAAAGATGGGTATACTAAAAATGAAATGCCTTCTACTGGTGGCGATGTCTCTTTGTTTTGTGACCCCCATAATAATTACTTGGAGTTGATTGACCTAGATGCGCCATTGTTGTAG 1065 0.4319 MAETKLIPGFRFHPTDVELVMYFLKRKITGRKFPFDVIAELDIYKYAPWDLPDKSLLKSGDLKWYFFSPVGKKYCTGGRMNRATEIGYWKTTGKDRAVEHGNQVVGMIRTLVFHIGKAPKGDRTDWVMHEFRLEDKDLADKGIAQNSYVICRVFQKEGPGPRNGAQYGKPFNEKDWDSEEEIDCLQSVPAAAMSLPATTLPSSSHISEENDMHPSTSGCIGRNSLSCLSRSVPSGLPHPSAPSNQIDDDILSMLAIFKDDEDTLAGNENNGSEVDNPGQANNAEGEPYLDPNEIFGDLGDLESLVGWDDGDGFSHDQKDGYTKNEMPSTGGDVSLFCDPHNNYLELIDLDAPLL 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi968g00003 354 FunFam Nac domain-containing protein 86 15 159 - -
Vivi968g00003 354 Gene3D NAC domain 15 158 IPR036093 GO:0003677|GO:0006355
Vivi968g00003 354 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
Vivi968g00003 354 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
Vivi968g00003 354 MobiDBLite consensus disorder prediction 263 289 - -
Vivi968g00003 354 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 4 224 - -
Vivi968g00003 354 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi968g00003 1 269 NAC Transcription Factor Family AT5G09330 51.890 5.25e-91 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vivi968g00003 NAM 1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi968g00003 - - adu:107470479 454.907