Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi966g00006 ATGCCGCGATCAAGTTCGGGAGTTCATCATCAGCGTCAAAGCTCTGATAACTTCATCCTTGATGCAAATTATCAGGGAAGATGGTTTCATCCTTCAGCTTTTGCACATGAATTTGGAACGCGATCTTCGAGTTTGAGGAAGAGCGAGGATGATAACGTGTTCATGAGTGGCTTGCTTGATTTACATTCCATTGATACTGAGCTTTTACCTGAGTGTTTTGATGACTCTGAGCCGATTTTCCCTGGAAACAAATTCGCACCAAGATCTCGGGGCTTGACTGAGAGCAATATTCTTAGAAGTTTCTCAGCTGATAAAGAGAGAGCAAACAATGTTGCTAAGATCAAAGTTGCAGTTAGGAAGAGACCACTGAATAAGAAGGAAATAGCAAAGAAAGAGGAAGATATTATTACAATAAATTCAAATTCTCTCACAGTACACGAAAGAAAACTCAAGGTTGACTTGACAGAATACGTTGAGAAACACGGGTTCTTTTTTGATGCTGTGCTGGATGAAGATGTTTCAAATGATGAAGTGTATGCTGAGACTGTAGAGCCCATAGTTCCATTGATATTCCAACGAACAAAAGCAACTTGCTTTGCTTATGGCCAAACTGGGAGTGGGAAGACGTATACAATGCAACCATTGCCTCTCAAAGCATCCCAAGATATTTTAAGATTAATGCACCACACGTACCGGAGCCAAGGTTTCCAATTATACTTTAGTTTTTTCGAAATATATGGGGGGAAACTGTTTGATCTCCTCAATGATAGAAAAAAACTTTGCATGAGGGAGGATGGTAAACAGCAGGTTTGCATTGTTGGCTTGCAGGAATACAGAGTATTTGAAGTTGAAACAATCAAGCAATTTATTGAGAAAGGAAATGCTTCAAGAAGTACTGGTACAACCGGTGCAAATGAGGAATCATCTCGTTCGCATGCTATACTTCAACTTGTTATCAAGAGATCAGCTGATGGGTCTGAATCAAAGCCCGCCCGAGTCATAGGCAAACTATCTTTCATAGATCTGGCTGGAAGTGAACGCGGTGCTGATACTACAGATAATGATAAGCAGACTAGGATTGAAGGGGCTGAAATTAATAAAAGCTTACTTGCACTGAAAGAATGCATCAGAGCCCTAGACAGTGACCAAGGGCATATCCCCTTCAGAGGAAGTAAATTGACTGAAGTTCTACGAGACTCTTTTGTTGGTGATTCACGGACTGTAATGATATCTTGCATTTCTCCAAGCTCGGGTTCATGTGAGCATACTCTCAACACATTAAGATATGCTGACAGGGTAAAGAGCTTGTCAAAGGGGAACAGCTCCAGAAAGGATTCACTTTCTCTATCCAACCTTAGAGACTCAGCTGTATTGCCGATTTTACCTCATGATGATACCTACGAAGATGAAATAACATATGTTTCCGGTGAGAGGAATCAATTTGGATGGTCCAAACAGTCTCAAAGAGAACCCTCGCCTCCAAAGAAGATGGACCGTGTTGCAAGTGGTAGGAAAGAGGAAAATTTGGAACCATCTGTGTACTCTGACCGACAAAGAGTTATTCGAAATGACAGAGCTGAGAAAGAAAACGATTACCTAATACCAACATATGGACAAGACAGAACAAGAAAAGCGAGCAAGAGGATAGATAACAACCAGTTATCTACCGTAGAAGACAAAAGGAAGATAGACTCTCGTGCTAAACATGCAAATCTATCAAATGTTGAGAATACATATTCTGATCACGATGATGATTTTAATGCTCTGCTGAAGGATGAGGAAGAACTTGTAACTGCTCACCGCAGACAAGTGGAGGAAACAGTAGATATTGTTAGGGAGGAGATGAATTTGCTCTTTGAAGCTGATCAACCAGGAAATCAATTGGATACTTATATTTCCAAATTGAATACCATTTTGTCTCAAAAGGCAGCAGGAATATTTCAATTGCAGACTCAGTTGGCTCAATTCCAGAGACGTTTAAATGAGTACAACTTTTTCTCATCCTCAGGTGACTGA 2016 0.4053 MPRSSSGVHHQRQSSDNFILDANYQGRWFHPSAFAHEFGTRSSSLRKSEDDNVFMSGLLDLHSIDTELLPECFDDSEPIFPGNKFAPRSRGLTESNILRSFSADKERANNVAKIKVAVRKRPLNKKEIAKKEEDIITINSNSLTVHERKLKVDLTEYVEKHGFFFDAVLDEDVSNDEVYAETVEPIVPLIFQRTKATCFAYGQTGSGKTYTMQPLPLKASQDILRLMHHTYRSQGFQLYFSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYRVFEVETIKQFIEKGNASRSTGTTGANEESSRSHAILQLVIKRSADGSESKPARVIGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDSDQGHIPFRGSKLTEVLRDSFVGDSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNSSRKDSLSLSNLRDSAVLPILPHDDTYEDEITYVSGERNQFGWSKQSQREPSPPKKMDRVASGRKEENLEPSVYSDRQRVIRNDRAEKENDYLIPTYGQDRTRKASKRIDNNQLSTVEDKRKIDSRAKHANLSNVENTYSDHDDDFNALLKDEEELVTAHRRQVEETVDIVREEMNLLFEADQPGNQLDTYISKLNTILSQKAAGIFQLQTQLAQFQRRLNEYNFFSSSGD 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi966g00006 671 MobiDBLite consensus disorder prediction 491 513 - -
Vivi966g00006 671 PRINTS Kinesin heavy chain signature 302 319 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi966g00006 671 PRINTS Kinesin heavy chain signature 386 407 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi966g00006 671 PRINTS Kinesin heavy chain signature 336 354 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi966g00006 671 PRINTS Kinesin heavy chain signature 193 214 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi966g00006 671 FunFam Kinesin-like protein 94 439 - -
Vivi966g00006 671 ProSiteProfiles Kinesin motor domain profile. 113 436 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi966g00006 671 CDD KISc_KIF2_like 113 434 - -
Vivi966g00006 671 PANTHER KINESIN-RELATED PROTEIN 6 30 666 IPR027640 GO:0003777|GO:0007018
Vivi966g00006 671 ProSitePatterns Kinesin motor domain signature. 335 346 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vivi966g00006 671 Pfam Kinesin motor domain 119 435 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi966g00006 671 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 111 436 IPR027417 -
Vivi966g00006 671 Gene3D Kinesin motor domain 93 439 IPR036961 -
Vivi966g00006 671 SMART kinesin_4 111 442 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi966g00006 671 MobiDBLite consensus disorder prediction 478 513 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi966g00006 112 436 Calmodulin-binding Proteins AT5G65930 35.821 2.19e-44 169