Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi964g00002 ATGACTCTCAACATGATCCTTATTTTGTGTCTTCACATTTTTTCAATTCAAATCTGTTATTGCCAAAATAATTCTCCTCAAAACATAGAAACTTTCTACCAAAATGGAACAACTTTAGTATCATCACCACCAAAGGCACCACCAAAGGAACAACTTTCATCACCACCACCTCGAGGACTAATCGCGGGATCGAAAAGTAGTTCGTCGAACGGTGAGATAGCGAAAGCTGTGGCTGCAACTGCAGCAAGCACTATAGTTATTTGTGGTTTGATTTTCATTATAGTGAAAAGGTGTTTGAGAAAAACAAAGAAAAACAACATTGTTTCTAATGTTGATAGGCAACAAGTTGATGTGCCTAGAGGGAATGTTTTTGAAAAGATTGATGGAAATGTGAGAGGGTTGATTGTTGATGAGGATGGTTTGGATGTGATTTATTGGAGAAAACTTGAAGAGAAGAATTCTAACAAGGATCTTTATAAGGACATCATCGCGAATAGTCCGAAAAATAAAGTCGAAGAAGATAGTCATGAAGAAGAGAATCAAGTGAAGAAATCTAAGTACATTCAAGAAACTCCTCTTCTTAAAGGACAATCTTCATCTTCACACATATTTCTAGAGGATGATCTATATAGAGTTCCAAGAATTCAATCTCAACCATCCAAAAATGAAGGATTTGTTAAAAAGGGTGTTGAAAAACAAGAATTTCAATCTCAACCATCCGTTTTGCAATCAATAGTTGCACCACCACCACCACCGCCTCCTCCAATGAAGGCAGCACCGCCACCTCCTCCTCCTCCAATGAAGGCTGCGCCGCCGCCACCTCCTCCAATGTCATCATCGAAAGCTATCTCGAAGACAGATCAAAGAAACTCTTTAGGGAAAGGTGTGGAAGAAGCCAACAATGATCAAGTGAAGTTGAAGCCTTTGCATTGGGATAAAGTGAATACTAATGCGGCTGATCATTCCATGGTTTGGGACAAAGTCGATCGCGGCTCGTTCAGGGTTGATCAAAATCTTATGGAAGCTCTCTTCGGTTATGTCGCAACTAATCGAATGTCACCTCATGGAAAGACTAACTCAACAAGTCCAAGCAATGATGTCTCAACAAAAAAGTTCCTTCTTGATCCTAGAAAATCACAAAACATTGCCATAGTTTTGAAATCACTAGCCCTCTCGCGAGACGAAGTTCTTGACGCGCTCATCGAAGGAAAAGGCCTAAATGGAGACACAATCGAAAAGCTTTCAAGAGTTTCACCAACAGAAGAAGAGAAATCACTTATCCTTCAATACAAAGAAGATCCATCAAGACTTGCTGCAGCAGAATCTTTCCTATATCACATCCTCACCGCCGTTCCTTCAGCGTTTAACCGCTTGAACGCGATGCTATTCAAGTTGAACTATGACTCGGAGGTCGCGGAGATCAAGGATTCTTTGCAGACTATTGAATTTGGATGTAAAGAGCTTAGAAGCCAAGGACTTTTCTTGAAGCTTCTAGAAGCGGTTCTTAAGGCCGGGAATCGAATGAACGATGGAACTTCTAGAGGTAATGCTCAAGCTTTTAACTTGAATTCACTAAGGAAACTCAATGATGTGAAAAGCAACGATGGAAAAACCACATTACTACACTTTGTTATCGAAGAAGTTGTTCATTCGGAAGGTAAACGCGCGGTTCTTAACCGAAATAACAGCCTAACACAAAACATGAGTCAAAAGAGAAGCATTAACATGAACGGAAACATCGAAACAAATGTTGTTTCGGATGAAAAAAGAGAAAGGGAATACACAATGTTAGGATTATCAATTGTGGGAGGAATAAGTTCTGAATTCAGCAATGTTAAAAAAGGAGCAAATTTGGATTATAAAAATTTGGTTGAATCAATTTCAACACTATCTATGAGACTAATTGAAATTCAAGAGCTTGTTTCACAATGTGAGAGTGGTGAAAGAGGAAATTTTGTGAAAGAAATGAATCATTTTATTGGAAATGCTGAGGAAGAACTGAAACTTGTTAGGGAGAAAGAAACAAGTGTGTTGCAGATTCTTGGTAAAACAACACAATATTATGAAAGTGGAGGTTCAAAAGAGAAACAAGAAAACAATCTTCAACTATTTGTTATAGTTAAAGATTTTTTGGGAATGGTTGATCAAGTTTGCATCGAAATCGCACGTGACTTGCAGAAGAAGAGTCCAAAAGGAATGTCGGGAAAATCATTAAGTTAA 2220 0.3856 MTLNMILILCLHIFSIQICYCQNNSPQNIETFYQNGTTLVSSPPKAPPKEQLSSPPPRGLIAGSKSSSSNGEIAKAVAATAASTIVICGLIFIIVKRCLRKTKKNNIVSNVDRQQVDVPRGNVFEKIDGNVRGLIVDEDGLDVIYWRKLEEKNSNKDLYKDIIANSPKNKVEEDSHEEENQVKKSKYIQETPLLKGQSSSSHIFLEDDLYRVPRIQSQPSKNEGFVKKGVEKQEFQSQPSVLQSIVAPPPPPPPPMKAAPPPPPPPMKAAPPPPPPMSSSKAISKTDQRNSLGKGVEEANNDQVKLKPLHWDKVNTNAADHSMVWDKVDRGSFRVDQNLMEALFGYVATNRMSPHGKTNSTSPSNDVSTKKFLLDPRKSQNIAIVLKSLALSRDEVLDALIEGKGLNGDTIEKLSRVSPTEEEKSLILQYKEDPSRLAAAESFLYHILTAVPSAFNRLNAMLFKLNYDSEVAEIKDSLQTIEFGCKELRSQGLFLKLLEAVLKAGNRMNDGTSRGNAQAFNLNSLRKLNDVKSNDGKTTLLHFVIEEVVHSEGKRAVLNRNNSLTQNMSQKRSINMNGNIETNVVSDEKREREYTMLGLSIVGGISSEFSNVKKGANLDYKNLVESISTLSMRLIEIQELVSQCESGERGNFVKEMNHFIGNAEEELKLVREKETSVLQILGKTTQYYESGGSKEKQENNLQLFVIVKDFLGMVDQVCIEIARDLQKKSPKGMSGKSLS 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi964g00002 739 SMART it6_source 296 729 IPR015425 -
Vivi964g00002 739 MobiDBLite consensus disorder prediction 244 279 - -
Vivi964g00002 739 PANTHER FORMIN-RELATED 31 725 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vivi964g00002 739 SUPERFAMILY Formin homology 2 domain (FH2 domain) 261 726 - -
Vivi964g00002 739 MobiDBLite consensus disorder prediction 230 303 - -
Vivi964g00002 739 MobiDBLite consensus disorder prediction 40 68 - -
Vivi964g00002 739 ProSiteProfiles Formin homology-2 (FH2) domain profile. 296 739 IPR015425 -
Vivi964g00002 739 Pfam Formin Homology 2 Domain 299 714 IPR015425 -
Vivi964g00002 739 Gene3D Formin, FH2 domain 316 736 IPR042201 -
Vivi964g00002 739 MobiDBLite consensus disorder prediction 280 297 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi964g00002 3 728 FH2 protein (formin) Gene Family AT1G70140 42.761 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi964g00002 - - gmx:100783219 845.499