Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi963g00016 ATGGGTGGGTGTTTTCCTTGTTTTGGATCATCCAACAAGGAGGACACTAAAGGTGTGAAGGAAGTTGCGAAGAAAGAGGGGTTTAAAGAAGGTTCTGTTGCTCAATCTCATCACCCCACTAGGGTTAGCTCAGATAAATCGAAGTCACGAAGTGTATCAGATTCTAAGAAGGAAGCGCCAGCTCCAAAGGATGGACCAACGGCACATATTGCTGCACAGACATTTACATTTCGAGAGCTTGCGGCTGCTACAAAGAATTTTAAGCCAGAGTGTTTATTAGGTGAAGGAGGTTTTGGACGTGTTTACAAAGGTCGCCTTGAGAGCACGGGACAGGTGGTTGCTGTAAAACAGCTTGACCGAAATGGACTTCAAGGAAATCGAGAGTTTTTGGTGGAAGTTCTCATGCTCAGCCTCTTACATCACCCAAACCTTGTGAACTTAATTGGTTATTGCGCCGATGGTGATCAGCGGCTTCTCGTTTATGAGTTTATGCCATTGGGATCTTTGGAGGATCATTTACATGATCTTCCTCCTGACAAGGAGCCTCTAGACTGGAACACAAGGATGAAAATAGCAGCTGGTGCAGCAAAGGGATTGGAATATCTGCATGACAAAGCAAACCCCCCTGTGATATACAGAGACTTGAAATCATCCAACATCCTCCTAGACGATGATTTTCATCCTAAGTTATCAGATTTTGGGCTGGCAAAACTCGGTCCAGTTGGTGACAAGACTCATGTATCTACACGAGTAATGGGAACATATGGCTATTGTGCCCCAGAATATGCTATGACAGGTCAACTAACTCTCAAATCAGACGTCTATAGTTTCGGAGTTGTCTTCCTTGAACTCATTACTGGGCGCAAGGCTATTGATAATACTCGTGGGCACGGTGAGCATAATCTCGTGGCATGGGCACGACCTCTATTTAAAGACCGCAGGAAGTTTCCCAAAATGGCTGATCCACTACTTCAAGGTCGATATCCAATGCGGGGACTGTACCAGGCACTAGCAGTTGCAGCAATGTGTTTACAGGAACAAGCTGCCACAAGACCTCTTATAGGAGATGTTGTGACTGCTCTCACATATCTCGCCTCGCAGACTTTCGATCCGAATGCAGCCACTCAGTCAAACAGGCTCGGTTCCTCAACTCCTAGGATGAGGACAGACAGTATGGATAGTCCCGACCGCAGACAGCTTGGTTCTCCGTCTACCCACAGAAACTCACCTGACTTCAGGAAGAGAGACAGCAGGGATCCAAGTGAGTTGAGCAGGGTTGACACAGGTGGCAGTGGTTCAGGGAGAAAATGGGGAGGAATGGATGATCTGGAAAGGCATGATTCTCAGAGAGATAGCCCTGTAAATACCGGAAGAGCTAGAGAGACTCCAAGGAACCGTGACCTGGACAGAGAACGCGCAGTGGCGGAAGCAAGAGTATGGGGTGAGAATTGGAGAGAGAAGAAAAGAGCAAATGCAATGGGAAGCTTTGATGGTACAAATGAATGA 1506 0.4688 MGGCFPCFGSSNKEDTKGVKEVAKKEGFKEGSVAQSHHPTRVSSDKSKSRSVSDSKKEAPAPKDGPTAHIAAQTFTFRELAAATKNFKPECLLGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDDDFHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRGHGEHNLVAWARPLFKDRRKFPKMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTFDPNAATQSNRLGSSTPRMRTDSMDSPDRRQLGSPSTHRNSPDFRKRDSRDPSELSRVDTGGSGSGRKWGGMDDLERHDSQRDSPVNTGRARETPRNRDLDRERAVAEARVWGENWREKKRANAMGSFDGTNE 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi963g00016 501 MobiDBLite consensus disorder prediction 1 20 - -
Vivi963g00016 501 FunFam Serine/threonine-protein kinase PBS1 164 379 - -
Vivi963g00016 501 Pfam Protein kinase domain 92 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi963g00016 501 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Vivi963g00016 501 PANTHER OS07G0668900 PROTEIN 4 373 - -
Vivi963g00016 501 MobiDBLite consensus disorder prediction 373 389 - -
Vivi963g00016 501 MobiDBLite consensus disorder prediction 438 454 - -
Vivi963g00016 501 SUPERFAMILY Protein kinase-like (PK-like) 68 361 IPR011009 -
Vivi963g00016 501 MobiDBLite consensus disorder prediction 373 501 - -
Vivi963g00016 501 Gene3D Phosphorylase Kinase; domain 1 59 163 - -
Vivi963g00016 501 Gene3D Transferase(Phosphotransferase) domain 1 164 381 - -
Vivi963g00016 501 ProSiteProfiles Protein kinase domain profile. 87 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi963g00016 501 MobiDBLite consensus disorder prediction 408 423 - -
Vivi963g00016 501 MobiDBLite consensus disorder prediction 460 492 - -
Vivi963g00016 501 CDD STKc_IRAK 93 362 - -
Vivi963g00016 501 MobiDBLite consensus disorder prediction 41 63 - -
Vivi963g00016 501 FunFam Serine/threonine-protein kinase PBS1 60 163 - -
Vivi963g00016 501 SMART serkin_6 87 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi963g00016 501 ProSitePatterns Protein kinases ATP-binding region signature. 93 116 IPR017441 GO:0005524
Vivi963g00016 501 MobiDBLite consensus disorder prediction 26 68 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi963g00016 4 366 Glycoside Hydrolase AT3G07070 65.659 6.17e-172 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Vivi963g00016 Pkinase 3.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi963g00016 - - gmx:100814575 888.256