Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi963g00009 ATGTTTCGTTACAACATTGCCAGCTCATTGTTCTACCGTAATAACCTCACATTCACAACTCGCTCTCCCTTTTCATCATCTTCTTCTTCTTCCAAAAACCACGCTTTCACTGTCAACTACCTCATTCAAAACCTCAGTTTCTCTCCACAAACAGCTTCCAAAATCTCCACCAAACTTCTTCTCCACAACTCTCAAAACCCCGATTCAGTCCTCGCATTATTCAAATCCCACGGCTTCTCAAATTCCCAGCTTTCCACTATCATCAAAACCTGCCCCATTCTCCTCACTTACGACCCCAACAAAACCATTCTCCCCAAACTCAATTTCCTTCTCCAAAAGGGTGCTTCCACTTCAGACCTCATCGACATCATCACCAAAAATCCAAGGTTCTTATACCTCAGCTTGCAAAATTCCATCACCCCATTTTATGATTTAGTCAAAAGATTCCTACTTTCTGATCAATCAACCATCGCCTCTATCAAAATTAACCCTTGCTTCATTTCTTCTAAAACCCTTTCTCACAATATTCAATTTCTCCTTCAAAATGGGGTCCCTGACTCTAAAGTTGTTTCCTTTTTGCTTCGAAATTGGAATAACCTACTCACTCAAAACCCTTCATTGTTTAAGAAGGTAGTGGTGGAAGTAATGGAATTGGGATTCAACCCCAAAACTACTTTTTTCACTGTAGCATTGCGTGCTAAGATTATGAAACCCATATGGGAAACCAAGATTCATGTCTATAAGAAATGGGGTTGGTCTGAAGAAAATATTGGGTCCGCATTTGTCATGTATCCATGGTGTATGTTGGCATCTGTGGATAACATTGAGGCATCGATGAATTTTTTTGTCAATCACATGGGTTGGGATTCCCGTGTGCTTGCCAAAAATCCAATACTTCTTTTGCTGAGTCTGGAGAAAAGGGTTATTCCTAGGGCTTTTGTCTTGAAGTTTCTTGAATCTAAAGGTTTGATTAAGGATGCTAAATTGGCTGCTCCTTTCAGAGTGTCTGAGGATTTGTTTTTGAAGAGATATGTGAATCGATTTAAGGAAGAATCTTGTCAGTTGTTGGAATTGTATCAAGAGAAAAAAGGTGTTTCAAATAAGACTTTGCGACAGAAATATGGGAAGCGACATAAACTGTCTCCACAACCATGA 1155 0.3965 MFRYNIASSLFYRNNLTFTTRSPFSSSSSSSKNHAFTVNYLIQNLSFSPQTASKISTKLLLHNSQNPDSVLALFKSHGFSNSQLSTIIKTCPILLTYDPNKTILPKLNFLLQKGASTSDLIDIITKNPRFLYLSLQNSITPFYDLVKRFLLSDQSTIASIKINPCFISSKTLSHNIQFLLQNGVPDSKVVSFLLRNWNNLLTQNPSLFKKVVVEVMELGFNPKTTFFTVALRAKIMKPIWETKIHVYKKWGWSEENIGSAFVMYPWCMLASVDNIEASMNFFVNHMGWDSRVLAKNPILLLLSLEKRVIPRAFVLKFLESKGLIKDAKLAAPFRVSEDLFLKRYVNRFKEESCQLLELYQEKKGVSNKTLRQKYGKRHKLSPQP 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi963g00009 384 PANTHER CGI-12 PROTEIN-RELATED 33 350 IPR003690 GO:0003690|GO:0006355
Vivi963g00009 384 SMART mt_12 121 152 IPR003690 GO:0003690|GO:0006355
Vivi963g00009 384 SMART mt_12 157 185 IPR003690 GO:0003690|GO:0006355
Vivi963g00009 384 SMART mt_12 290 324 IPR003690 GO:0003690|GO:0006355
Vivi963g00009 384 SMART mt_12 191 221 IPR003690 GO:0003690|GO:0006355
Vivi963g00009 384 SMART mt_12 258 289 IPR003690 GO:0003690|GO:0006355
Vivi963g00009 384 SMART mt_12 85 116 IPR003690 GO:0003690|GO:0006355
Vivi963g00009 384 FunFam Mitochondrial transcription termination factor-like 135 352 - -
Vivi963g00009 384 Gene3D Transcription termination factor 3, mitochondrial 133 354 IPR038538 -
Vivi963g00009 384 Pfam mTERF 71 221 IPR003690 GO:0003690|GO:0006355
Vivi963g00009 384 Pfam mTERF 242 340 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi963g00009 mTERF 2.9e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi963g00009 K15031 - gmx:102663105 375.941