Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi963g00008 ATGTTTCGTTACAGTCGCAGAGCATTCCTCTGCCATAACCCTAACCCTAACCTCACATTCACAAAACCCTCTCCCATTCTCAACCTTCTCCTCCAACCCTTTTCATCCTCTCCCCAAAACCATACTTTCACACTCAACTACCTCATTCAAAACCTCGCTTTCTCCCCCGAAACCGCCTCCAAAATCTCCACCAAAGTTAATCTCACCAACTCACAAAACCCCGATTCCGTCCTCGCCTTATTCAAATCCCACGGCTTCTCAAATTCCCAGCTTTCCACTATCATCAAAACCTGCCCCATTCTCCTCACTTACGACCCCAACAAAACCCTTCTCCCCAAACTCAATTTCCTTCTCCAAAAGGGTGCTTCTACTTCAGACCTCATCGACATCATCACCAAAAACCCAAGGTTCTTATATCTCAGCTTGCACAAATCCATCACCCCATTTTATGATTTAGTCAAAAGATTCCTACTTACCGATGAATCGACCATCGCATCTCTTAAATTACACGTTTGCTTGATTTATTCGAGAACCCCGTCTCGGAATATTCAATTCCTGATTCAAAATGGGGTTCCCGAGTCTAAAGTTGGTATTTTGTATCGAAATTGGTATATTGTACTCACTCAGAATCCTCCGGTATTTGAGAAGGCAGTGATGGAACTAATTGAATTGGGATTCAACCCCAAAACTACTTTTTTCACTGTCGCATTGCGAGCTAAGCTTATGAAACACAGATGGCAAACCAAGGTTGATGTCTACAAGAAATGGGGTTGGTCTGAGGAAGATATTGTGTCGGCATTTTTGAGGTATCCGTGGTGTATGATGGCATCTGTGGATAAAATTGAGGCAGTAATGAAGTTTTTTGTTGATCACATTGGTTGGGATTCGCGTGTACTTGCGAAAGATCCCGTACTTATTATGATGAGTTTGGAGAAAAGGGTTATTCCTCGGGCTTTTGTCTTGAAATATCTTGAATCCAAAGGTTTGGTTAAGGATACTAAATTGGTTAGACCCTTCATTGTTACTGAGGATGTATTTTTGAAGAAATTTGTGAATTGTTTTAAAGAAGAAGCTTCTTATTTGTTGAAGCTGTATGAAGAGAAAAAAGATGTTTCAAATAGTGTTTGA 1128 0.4096 MFRYSRRAFLCHNPNPNLTFTKPSPILNLLLQPFSSSPQNHTFTLNYLIQNLAFSPETASKISTKVNLTNSQNPDSVLALFKSHGFSNSQLSTIIKTCPILLTYDPNKTLLPKLNFLLQKGASTSDLIDIITKNPRFLYLSLHKSITPFYDLVKRFLLTDESTIASLKLHVCLIYSRTPSRNIQFLIQNGVPESKVGILYRNWYIVLTQNPPVFEKAVMELIELGFNPKTTFFTVALRAKLMKHRWQTKVDVYKKWGWSEEDIVSAFLRYPWCMMASVDKIEAVMKFFVDHIGWDSRVLAKDPVLIMMSLEKRVIPRAFVLKYLESKGLVKDTKLVRPFIVTEDVFLKKFVNCFKEEASYLLKLYEEKKDVSNSV 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi963g00008 375 PANTHER CGI-12 PROTEIN-RELATED 41 357 IPR003690 GO:0003690|GO:0006355
Vivi963g00008 375 Gene3D Transcription termination factor 3, mitochondrial 177 364 IPR038538 -
Vivi963g00008 375 Gene3D Transcription termination factor 3, mitochondrial 40 176 IPR038538 -
Vivi963g00008 375 Pfam mTERF 78 228 IPR003690 GO:0003690|GO:0006355
Vivi963g00008 375 Pfam mTERF 244 346 IPR003690 GO:0003690|GO:0006355
Vivi963g00008 375 SMART mt_12 296 330 IPR003690 GO:0003690|GO:0006355
Vivi963g00008 375 SMART mt_12 264 295 IPR003690 GO:0003690|GO:0006355
Vivi963g00008 375 SMART mt_12 128 159 IPR003690 GO:0003690|GO:0006355
Vivi963g00008 375 SMART mt_12 92 123 IPR003690 GO:0003690|GO:0006355
Vivi963g00008 375 FunFam Mitochondrial transcription termination factor-like 142 358 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi963g00008 mTERF 6.3e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi963g00008 K15031 - gmx:102663105 419.468