Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi960g00002 ATGATGAAATGGAGTGGAAATGGAAGAAAATCTTCAACTTCTTCATCTTCTTCATCTGGTTCTTTTTCTTGGCTTTCAAAGCTAAAACACATGAGAATCATCAATTCAGATTCAAATAAGGAAAAGAAGAAACCTACTGCATCGGTTAAGGATATTCCATCTCCACCTTCTTGTTTCGATATCGGCGGAAGGAATGGTAAGAAGAATGGAAGAAGATCGCACTCACAAGGTGCAATCAAGTTAGATCAGAAGGATGTGATTGGTTTAGAAGACGAGAGAAAACTGGTAAATGATAAGAAGAGTTTGATCCAGGTTGATGAGTTTGATAGAGATAAAGAATATGAAAATATAAGGAGAAGATTCGAGCGAAAAGCGCAACAGGTTTTGGAAGAACAGCTTTTGAAGTTAGAAAGAGAAGCAAAGGAAGTCGAAGAGCTTCAATATGAATCTCCGAGAACAATTTGTACACCAAGAACAAGTACAACAACAACGCGTTCTTTTGCTTCGTCTAATGCAGGTTTGAAGAAGATTTCTTGTAGCCTAAGAAACATCACAGTGAATGCATCATCTGAGAAGAAACAGGTTTCTGAGAAGCAAAATTCGAAAGAAATTGAAGATTTGAAGGTGAAGACGCAAGAAAAACAAAGGAGGAAAGTAAAGAAGGTTTCGAGGGTGAAGATATATTCACCAAGGATGATATCAAAACTTGAAATAAGCAGAATAAAAGCGTTAGAAGAGATGAGGAACAAGGCAAAGCAAAAGATGAAGAGAGAAAAGAAGGAAGAGATTATGGAGGAGATTAGTATTAATATTAAACCAGAATTAGATAGTTTTGCTGTGATTAAGTGTTCATTGAATCCAAAGCAGGATTTTAGGGATTCAATGATTGAGATGATTGAAGAGAAGAGGATTAGTAAGGCAGAAGAAATGGAAGAGTTGTTGGCATGTTATTTGACTTTGAATGCTGATGAGTATCATGATATGATAATCAAAGTGTTTAGGCAGGTATGGTTTGATATGAGTCAGTATGGTTTTGGTATTAATTAA 1047 0.3582 MMKWSGNGRKSSTSSSSSSGSFSWLSKLKHMRIINSDSNKEKKKPTASVKDIPSPPSCFDIGGRNGKKNGRRSHSQGAIKLDQKDVIGLEDERKLVNDKKSLIQVDEFDRDKEYENIRRRFERKAQQVLEEQLLKLEREAKEVEELQYESPRTICTPRTSTTTTRSFASSNAGLKKISCSLRNITVNASSEKKQVSEKQNSKEIEDLKVKTQEKQRRKVKKVSRVKIYSPRMISKLEISRIKALEEMRNKAKQKMKREKKEEIMEEISINIKPELDSFAVIKCSLNPKQDFRDSMIEMIEEKRISKAEEMEELLACYLTLNADEYHDMIIKVFRQVWFDMSQYGFGIN 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi960g00002 348 MobiDBLite consensus disorder prediction 33 48 - -
Vivi960g00002 348 NCBIfam uncharacterized plant-specific domain TIGR01568 279 340 IPR006458 -
Vivi960g00002 348 Coils Coil 119 149 - -
Vivi960g00002 348 Coils Coil 241 264 - -
Vivi960g00002 348 Pfam Transcriptional repressor, ovate 284 340 IPR006458 -
Vivi960g00002 348 MobiDBLite consensus disorder prediction 1 25 - -
Vivi960g00002 348 MobiDBLite consensus disorder prediction 1 78 - -
Vivi960g00002 348 ProSiteProfiles OVATE domain profile. 280 339 IPR006458 -
Vivi960g00002 348 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 132 341 IPR038933 GO:0045892
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vivi960g00002 Ovate 6.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi960g00002 - - cam:101515364 311.227