Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi95g00018 ATGGCTAGTGAATTTACTCCTATTCATTTTTTCAAGATTATTCTTGCTGAAAGTCTTGATCAAGGAAAGCTTATGATACCAATTAAGTTTGTCAAGAAATATGGACAATGTTTACCAACAACTATATGTATAAGGACTCACAATGGTGTGGATTGGAAAATAAATTTGGTTAAAAGTGATGGCAAGATATGGTTTGAAAAGGGTTGGAAAGAATTTGCAGAATATCATTCTCTATCTCATGGCCATCTTCTTGTTTTCAAATATGAAGGCACTTCTCATTTCGAGGTAAGAATATTTGACAAGAGTGCTTTAGAGATAAACTATCCTTTCAAAAGAGCTGAAGTCAACACGGAAGAAGATTGTAGAGTAAGACAAACGAGAAAAGCTTATTCCTCCTTTGAAATTGGAAGCACCAGTTGTGTGAAAAAACACAAAGGAAAACAAGTGAATACAACACTTGAAAGAGCAGAAGAGTTCAAAACATGCAATCCATCATTTGTTGTTGTCATGGGTGAATCTTATGTTGGAAGCCGATTTCTTTTGTCTATACCTTGTATATTTGGCAAGACTCACTTTGATTTGGACAAGAAGAAAGGGTATATTTGTTTCCAGGTATTAAATTATGAAAAAGTTTGGCTTGCAAAGTACCGAATTAGGATGATCGCGACAGGACTAAAATTTGAACTCACTGGTGGATGGAGGAAATTCTCAAAGGACAATAATTTGAAAGTTGGAGATGTTTGCAAGTTTGAGCTCATTCATAAAACTAATATGACTTTTCAAGTTCACATCTTTAGAGAAGATGAATGA 810 0.3432 MASEFTPIHFFKIILAESLDQGKLMIPIKFVKKYGQCLPTTICIRTHNGVDWKINLVKSDGKIWFEKGWKEFAEYHSLSHGHLLVFKYEGTSHFEVRIFDKSALEINYPFKRAEVNTEEDCRVRQTRKAYSSFEIGSTSCVKKHKGKQVNTTLERAEEFKTCNPSFVVVMGESYVGSRFLLSIPCIFGKTHFDLDKKKGYICFQVLNYEKVWLAKYRIRMIATGLKFELTGGWRKFSKDNNLKVGDVCKFELIHKTNMTFQVHIFREDE 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi95g00018 269 ProSiteProfiles B3 DNA-binding domain profile. 166 268 IPR003340 GO:0003677
Vivi95g00018 269 SUPERFAMILY DNA-binding pseudobarrel domain 162 266 IPR015300 -
Vivi95g00018 269 SMART B3_2 10 102 IPR003340 GO:0003677
Vivi95g00018 269 SMART B3_2 166 268 IPR003340 GO:0003677
Vivi95g00018 269 Gene3D - 3 103 IPR015300 -
Vivi95g00018 269 Pfam B3 DNA binding domain 166 267 IPR003340 GO:0003677
Vivi95g00018 269 Pfam B3 DNA binding domain 11 101 IPR003340 GO:0003677
Vivi95g00018 269 CDD B3_DNA 164 266 IPR003340 GO:0003677
Vivi95g00018 269 ProSiteProfiles B3 DNA-binding domain profile. 9 102 IPR003340 GO:0003677
Vivi95g00018 269 Gene3D - 144 269 IPR015300 -
Vivi95g00018 269 CDD B3_DNA 9 100 IPR003340 GO:0003677
Vivi95g00018 269 PANTHER B3 DOMAIN-CONTAINING 6 262 - -
Vivi95g00018 269 SUPERFAMILY DNA-binding pseudobarrel domain 5 102 IPR015300 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi95g00018 10 269 B3 DNA Binding Superfamily AT3G18990 27.778 1.71e-31 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Vivi95g00018 B3 2.1e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi95g00018 - - vvo:131624179 400.979