Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi957g00003 ATGTCGTCCTCTTCTTCTTCTTCCTCCGGTGGAGGAGCTTTCAGGTTTCGTTGGGACGTGTTTTTGAGCTTCAGAGGTGAAGATACTCGCGAATGCTTCACCAAACAACTATATGAATCTCTCCACAGTCCAGGTGTTCGTGTTTTCATGGACGACGAAGGTTTGGACCGTGGGGATCGCATAGATATCACTCTTCTTCAAGCCATTGATGACTCTGCTGCCTCCATCGTTATTATCTCTCCAAAGTACGCTGAATCTCATTGGTGTCTCGATGAACTTGTCAGAATTTTTGAGAGTAAGAGGCTTGTTATTCCCGTTTTCTATCAGGTTGATCCTTCTCATGTTCGGAAACAGTCGGGGCCTTTTCAAAAAGGTTGTACCGATCTTCAAAACAGATTTGATAAAGATATGGTTTCCAAGTGGAGAGATTCTATGAAACAACTTGGCGGACTTGCTGGCTTTGTTTTCAATCACAGTTATAAAGGCGAGCGTGAGAATCTGATACATCTTTTGGTGAAAAGGGTTTGGAGGGAGTTAAGAAATACTCCAATGGTTGTGGCTGAGTTTCTAGTCGGACTCAATGAACGTGTTGACAAGGTGATGAATCTGTTACAACTTCAATCCAATACAGTCAAGGTCTTAGGGTTGTATGGGATGGGAGGTGTTGGTAAGACAACCCTTGCCAAGGCTCTTTTCAACAGTCTCGTGGGTCGTTTTGAACGGAGATGTTTCGTTTCAAATGTGAGACACTCCTCATCCAAAGAGGGGGGTTTGCTTTCTCTTCAAAGCAATATCATTAAAGATCTTTCTTCTAAAGATGGAACTCAGAGTTCTATCGGTGACGGCAATGCTGGTATTGCTACAATAAAAAGAATAGTTCATGAAAATCGAGTTCTGCTAGTGCTAGATGATGTTGATAATGTAAACCAGCTTGATGCTTTGATTGGTAAAAAGGAATGGTTTTATGAAGGAAGCTGTATCATAATTACAACAAGGGATACAAGTGCTTTGCCTGAAAAACATGTCAATAAGTTGTATGAAGTCAAAGAATTGTATGAGGAAGAAGCTTTACAGTTATTCAGTTACCATGCTTTCAGGAAAAAGGACCCTCCACCAAGTTTTCTGGAATTTTCAAAGAAAATTGTATCTCTTACAGGAAGAATGCCATTGGCTTTGGAAGTGTTTGGTTGCTCTATGTGTGAGAGGAGGAGGGTGGAGGAGTGGGAGGATGCTCTTGAGAAGTTGAGAACAATTCGGCCTGGGAATCTTCATAATGTGTTGAAGATAAGTTATGATGGGTTGGATGAACAAGAGAAGTGTATATTCCTTGATATTGCTTGTTTATTTCTTCAAATGAGAATGAAGCGCGGTGATGTGATTGATATATTAAGAGGTCGTGGTTTTAGAGGAGAGATAGCTGTGACATACCTTGTACAGAAATGCTTAGTCAAAATAGGACATGACAATACCTTGTTGATGCATGATCAAATTAGAGACATGGGAAGACAGATTGTTATGGATGAAAACCATGTTGATCCTGGGATGCGTAGTAGATTGTGGGATCGTGCTGGAATCATGTCCGTTTTCAAGAATAAGAAGGGAACAAGATGCATACAAGGAGTTGTACTAGATTTTGAGAAAAGATTAATAAAGCCTGAAGCAGAGAAATATAACGATGTTATACTTGATAGAAAATCCTTTGAAACAATGGTTAACTTGAGATTGCTTCAGATCAATAATTTGAGTTTGGGAGGCATGTTTCTTCCGGATGAACTAAAATGGCTACAATGGCGAGGATGTCCTTTGGAGTGCATTCCTTTGGACACTTTGCCACATGAACTGGCTGTCCTTGATCTCTCAAATGCCGAGAAAATTAAAAGCTTGAGGGGATTGGAAAGTCACAAGGTACCAGAGAACCTAATGGTCATTAACCTCTCCCACTGCTTCCAACTAGCGGAAATCCCTGATTTATCTAGGTGTCTCAAGCTAGAGAAAATTATTTTGGATAGCTGCATTAATCTAAAAAGGATTCATGAATCAATTGGTGGTTTGACTACCTTGCGTAATTTGAACTTGCGGCGTTGTGGAAACATCACTCAGCTTCCCGGTGATATATGTGGGCTGAAACATCTGGAGATCCTAGTTCTTTCTAGTTGCACCAAGTTGAAAGCATTACCAAAAACCATAGGCAAGCTTATTTCGCTGAAAACACTTGAGGCTGATGACACTGCTATAGTTAAGCTGCCTGAGTCCATTTTTCGATTGACCAAACTCGAACGACTTGTTTTAGATCGTTGCTCATATTTGAGAAGACTACCAAAGTGCATTGGAAAGTTATGTTCTTTGCAAGAATTATCTCTTAATCAATCAGGCTTACAAGAATTACCCGACACTGTAGGAACCTTGAAAAATCTTGAGAAGTTAAGTTTGATTGGGTGTGAATCTCTCACGGTAATGCCTGATTCTATAGGAAATCTCGTATCGTTGACAGAACTTTTGGCTTACAACAGTGGAATTAAAGAACTCCCTTCCACCATTAGTTCTTTATCGTATCTGAGGATGTTATCAGTTGGAAATTGTAAACATCTCAGTAAATTGCCCGACTCAATGAAAACTTTGGCCTCAATTACTGAACTTAAGTTAAACGGAACACCTATCAAATATCTTCCAGAGCAAATTGGAGACATGAAACAGCTAATGATACTTGATATTGGAAATTGCAGCAATCTGGAATCATTACCAGAATCCATTGGCCACCTAGGATCTCTTACTACATTGAACATAGACAATGGAAATATTAAAGAATTACCAACGTCGATTGGATTATTGGAAAATCTTGATACCTTAACATTGAACAAATGTAGAATGCTTAAAAAGCTCCCAGCTTCTATTGGAAACTTGAAATCTCTAAGTCACTTAATGATAGAGGAAACAGCTATGTCAGACTTGCCTGAAAGCTTCGGTATGCTCTCAAACCTGAGATCACTTAGAATGGCAAAGAGGCCTATTTTAGTTCCCATATCTGTGGAGAAAAATGGTTCTTTTGTGATACCGTCTTCTTTCTGTAATCTGACCTTGCTCTATGAGTTCGATGCTCGTGCCTGGGGATTATCTGGGAAAATTCCTGATGAATTCGAGAAGCTATCATTAATAGAGACTTTAGATTTGGGCCAAAACAATTTCCACAGCCTTCCTTCCAGTTTGAAAGGTCTTTCCTCTCTTAAGAAACTCTCACTGCCAAATTGCACGGAGCTGACTTCTCTCCCCTCACTTCCTTCAAGCTTGATCGAGCTAAATGTTGACAATTGCTACGCATTAGAAAGTATACACAACATGTCAAATTTAGAGAGGTTGGAGGAGTTGAAACTCACAAACTGTGAGAAAGTGGTGGATATTCCAGGTCTTGAATGCTTGAAGTCCTTGAGAAGATTGTACCTGAGTGGTTGCAATGAATGTTCCTCCAAAGTACGCAAAAGACTTTCAAAGGTTGCACTGAGAAATTTTCAGAACTTGAGTATGCCAGGAACTAAGTTACCCGAATGGTTTTCGGGAGAAACTGTCGGCTTTTCTAAGCTCAAAAATCTTGAGCTAACAGGTGTAGTTGTAGGTGTTGTTTTCTCAATTAACCATAACAATAAGAATATTCAAACACATGGAGTGTTTGACGTTCAAGCAAATGTTCTCAAATCAGGCAAACTTACTCTTAGTTCAGGGCTATACATAGCCGGAGTGCCAAGGACAGATGAACCACACATATACTTGGGAAGGTACCATGATTACCATGCATTGGTATCCGATTTAAAAGATGCTGATACAGTTAGTGTGACAAAGAGGAGTCCTCCTTTTGATGAGAGGTTTGAATTGATAAAATGTGGAATTCATTTAATCTTTGAAGGGGATGATGATTATGAGGGAGACGAAGAATCGTTGGACAAAGGCTTACAATCTGTCTCAGAAAGGATGGCCAGGTTTTTTAACACTTATGATGAAGGTGTTGATAACACTTATGATGAAGTTGTTGATGCAACTGAGAGTGAAGATGAGTGTCAACATGAATAG 4059 0.3974 MSSSSSSSSGGGAFRFRWDVFLSFRGEDTRECFTKQLYESLHSPGVRVFMDDEGLDRGDRIDITLLQAIDDSAASIVIISPKYAESHWCLDELVRIFESKRLVIPVFYQVDPSHVRKQSGPFQKGCTDLQNRFDKDMVSKWRDSMKQLGGLAGFVFNHSYKGERENLIHLLVKRVWRELRNTPMVVAEFLVGLNERVDKVMNLLQLQSNTVKVLGLYGMGGVGKTTLAKALFNSLVGRFERRCFVSNVRHSSSKEGGLLSLQSNIIKDLSSKDGTQSSIGDGNAGIATIKRIVHENRVLLVLDDVDNVNQLDALIGKKEWFYEGSCIIITTRDTSALPEKHVNKLYEVKELYEEEALQLFSYHAFRKKDPPPSFLEFSKKIVSLTGRMPLALEVFGCSMCERRRVEEWEDALEKLRTIRPGNLHNVLKISYDGLDEQEKCIFLDIACLFLQMRMKRGDVIDILRGRGFRGEIAVTYLVQKCLVKIGHDNTLLMHDQIRDMGRQIVMDENHVDPGMRSRLWDRAGIMSVFKNKKGTRCIQGVVLDFEKRLIKPEAEKYNDVILDRKSFETMVNLRLLQINNLSLGGMFLPDELKWLQWRGCPLECIPLDTLPHELAVLDLSNAEKIKSLRGLESHKVPENLMVINLSHCFQLAEIPDLSRCLKLEKIILDSCINLKRIHESIGGLTTLRNLNLRRCGNITQLPGDICGLKHLEILVLSSCTKLKALPKTIGKLISLKTLEADDTAIVKLPESIFRLTKLERLVLDRCSYLRRLPKCIGKLCSLQELSLNQSGLQELPDTVGTLKNLEKLSLIGCESLTVMPDSIGNLVSLTELLAYNSGIKELPSTISSLSYLRMLSVGNCKHLSKLPDSMKTLASITELKLNGTPIKYLPEQIGDMKQLMILDIGNCSNLESLPESIGHLGSLTTLNIDNGNIKELPTSIGLLENLDTLTLNKCRMLKKLPASIGNLKSLSHLMIEETAMSDLPESFGMLSNLRSLRMAKRPILVPISVEKNGSFVIPSSFCNLTLLYEFDARAWGLSGKIPDEFEKLSLIETLDLGQNNFHSLPSSLKGLSSLKKLSLPNCTELTSLPSLPSSLIELNVDNCYALESIHNMSNLERLEELKLTNCEKVVDIPGLECLKSLRRLYLSGCNECSSKVRKRLSKVALRNFQNLSMPGTKLPEWFSGETVGFSKLKNLELTGVVVGVVFSINHNNKNIQTHGVFDVQANVLKSGKLTLSSGLYIAGVPRTDEPHIYLGRYHDYHALVSDLKDADTVSVTKRSPPFDERFELIKCGIHLIFEGDDDYEGDEESLDKGLQSVSERMARFFNTYDEGVDNTYDEVVDATESEDECQHE 1352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi957g00003 1352 PRINTS Disease resistance protein signature 385 399 - -
Vivi957g00003 1352 PRINTS Disease resistance protein signature 292 306 - -
Vivi957g00003 1352 PRINTS Disease resistance protein signature 213 228 - -
Vivi957g00003 1352 PRINTS Disease resistance protein signature 894 910 - -
Vivi957g00003 1352 SMART LRR_typ_2 826 849 IPR003591 -
Vivi957g00003 1352 SMART LRR_typ_2 684 708 IPR003591 -
Vivi957g00003 1352 SMART LRR_typ_2 732 755 IPR003591 -
Vivi957g00003 1352 SMART LRR_typ_2 1048 1070 IPR003591 -
Vivi957g00003 1352 SMART LRR_typ_2 779 802 IPR003591 -
Vivi957g00003 1352 SMART LRR_typ_2 873 896 IPR003591 -
Vivi957g00003 1352 SMART LRR_typ_2 920 943 IPR003591 -
Vivi957g00003 1352 Gene3D Ribonuclease Inhibitor 545 722 IPR032675 -
Vivi957g00003 1352 Gene3D Ribonuclease Inhibitor 723 1000 IPR032675 -
Vivi957g00003 1352 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 775 IPR044974 GO:0006952
Vivi957g00003 1352 Gene3D - 16 178 IPR035897 -
Vivi957g00003 1352 SMART till_3 17 151 IPR000157 GO:0007165
Vivi957g00003 1352 SUPERFAMILY RNI-like 776 1169 - -
Vivi957g00003 1352 SUPERFAMILY "Winged helix" DNA-binding domain 423 528 IPR036390 -
Vivi957g00003 1352 ProSiteProfiles TIR domain profile. 16 183 IPR000157 GO:0007165
Vivi957g00003 1352 SUPERFAMILY L domain-like 564 873 - -
Vivi957g00003 1352 Gene3D Ribonuclease Inhibitor 1001 1213 IPR032675 -
Vivi957g00003 1352 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 445 IPR027417 -
Vivi957g00003 1352 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 153 IPR035897 -
Vivi957g00003 1352 Gene3D - 350 435 IPR042197 -
Vivi957g00003 1352 Gene3D - 179 344 IPR027417 -
Vivi957g00003 1352 Pfam NB-ARC domain 195 421 IPR002182 GO:0043531
Vivi957g00003 1352 Pfam TIR domain 18 182 IPR000157 GO:0007165
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi957g00003 18 855 WRKY Transcription Factor Family AT4G12020 28.806 4.76e-73 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi957g00003 - - mtr:11408681 1964.89