Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi956g00025 ATGAACATGGATTTAGGTTGTAGTTTGCCACAGTCAAGAATTTTACACGGAGGCGTGGGGACTGGTTGCAAACAAAAATTAGTAGGTCAAGTAGGTTGTTTTGACTTTAGAAGGAGAGGTTTTGGTTCTGGTTTTTTGGGCAAGAGTGTTTCGAGATCACACTTTAGTGTGGAGACCAAAGTTAGTTGCGTTTCCGCTGGTTGGAATGATTCAAAAGTGGTTTCTAGTGGCGAGTTTAAAGTTTTGAACACTAAGAGACACACGTCTTGTAAGAATACGAAACTTCTTATGGGATCCAGAGTAATTTGGTTGAAGTGCCAGGGTAATGATTCTTTAGCTTATGTTAATGGAAATGGCCGCAGTGTTGATTATGTGGAAGGTTCAGGCGAGGATGCAGAGGTGGCACATGCATCTAATGAAGGATTGGATGTTCCTGTGGAAGAAGAAGGGAAAGTTGGGAAGGATATAGGAGTGGAGGTACTAAGTGTGGAAGAATTGAAAGAACTACTGCAAAAGGCCTTGAAAGAGCTTGAAGTGGCACAAATAAATAGTACTATGTTTGAGGAAAAGGTTAAAAAAATATCAGAGACTGCCATCTTTTTGCATGACGAAGCAGCCCGATCTCTGAATGATGTTAATTCTTCCCTTGACACCATTCAAAAAGTTGCAAATGAAGAACATTTGGCCAAAGATGCTGTCCAAAATGCTACAATGGCTCTTTCATTAGCTGAGGCAAGACTTCAGGTAGCCGTAGAGTCTTTAGAAGCTGCAAAAGAAGTGCATGAAGGTTCTAATGAGATTGATGGTGATAGGGACTTAACAGAAAAGGAGAACACACTTTTTGTTGCGCAAGAAGATATAAAGGCATGCCAGGAAAATTTGGCAAATTGCGAGGTAGAGTTGAGGCGCTTTCAAAATAAAAAGGAGGAGTTGCAAAAGGAAGTTAGCAAATTGCAAGAAGTTGCTGAAAAGGCACAGCTGGATGCAATGAAGGCTGAGGAGGATGTTACAAACATAATGCTTTTAGCAGAGCAAGCTGTTGCATTTGAACTTGAGGCTACACAACGCGTGAATGATGCAGAGATTGCTTTACAGCGAGCTGATAAGTCTGTTTCAAATTCGAATGCTGACACTGTAGAGACTATTCAAGTACAAGATGTTGTGCTTGTTTCTGAGGAGGAGAACATGGTAGAAATTATTTCTGATGAAGTCACGGTTGGTAGAGACAAAGATTTGGCCACAGTTGATGATGCATCTTTACTTACCAAGTTGTCACCCGAAACACAATCTGAACAAACCAGCCAAATTTCAGATGACACAGCACAATCTGATTATACAAGTGATAATGAGAATGCCGTCCAAACAAAAAAGCAGGAAGCACAGAAAGATTTGACTAAAGATAGTTCACCATTTGCTCCCAAATCAAAAAAGTCATCTCGATTCTTTCCAGCATCGTTCTTTTCTTTTCCTGAAGAGGAGACTGAGTCCACACCAGCTTCAGTTTTCCAGGGCCTCATATTATCTGCGAAGAAGCAGTTGCCCAAGCTAGTTCTTGGGTTATTGTTAATGGGAGCAGGAGCTGCTGTCTATGCCAATAGGGCAGAGAAAAATCCTCGGCTCCTTCAACAGGCAGATGTTATTGCGACCAGTGCTGAAGAGTTTTCTTCTAATGCAAAGCCTCTACTTAGGAAACTCCAGAAAATCCCCAAGAAAATTAAGAAAATCATTGCATCATTACCTCATCAAGAGGTGAATGAGGAAGAAGCCTCCCTCTTTGACATGCTCTGGTTATTACTTGCAAGTGTTATATTTGTGCCAATATTTCAAAAAATCCCTGGAGGAAGTCCTGTTCTTGGCTACTTGGCTGCTGGTATCTTGATTGGGCCTTACGGTCTCTCCATCATTCGTCATGTTCATGCAACAAAAGCAATAGCTGAATTTGGAGTTGTTTTCCTTTTATTCAATATTGGCCTGGAGCTCTCCGTTGAAAGGCTCAGTTCTATGAAGAAATATGTTTTTGGATTAGGTTCTGCACAGGTTTTGGCAACTGCTGCAGTTGTTGGCTTGGTGGCTCATTATATCTGTGGTCTGCCTGGCCCTGCTGCTATAGTTATCGGGAATGGCCTGGCTTTATCATCCACTGCCGTTGTTCTGCAGGTGTTGCAGGAAAGAGGCGAGAGCACATCACGGCATGGTCGAGCGACATTTTCTGTTTTACTTTTTCAGGATTTGGCTGTCGTAGTCTTGCTAATACTCATACCTCTTATTTCACCTAATTCTTCCAAAGGAGGGGTTGGTTTTCAAGCCATTGCTGAAGCTCTTGGACTGGCAGCTGTTAAAGCAGCAGTTGCCATTACTGCCATAATTGCAGGTGGACGATTGCTACTTCGGCCAATATACAAGCAAGTTGCAGAAAATCAAAATGCTGAAATATTCTCAGCCAATACACTTCTTGTTATTCTTGGGACCAGTCTTCTTACTGCCAGGGCAGGACTTTCCATGGCACTGGGAGCATTTTTGGCTGGTTTACTACTGGCAGAAACTGAATTTTCCTTACAGGTTGAATCTGATATTGCTCCATATCGTGGCCTTCTTTTGGGGCTCTTCTTTATGACGGTTGGAATGTCAATCGATCCAAAACTTTTTGTTTCAAACTTCCCAGTCGTCACGGGGACACTGGCACTCTTAATATGTGGCAAGACTATCTTAGTTTCTTTGATGGGTAGAATCTTTGGGATTTCCCTCATTTCTGCTTTAAGAGCTGGTCTTCTTCTTGCTCCTGGTGGTGAATTTGCATTTGTGGCTTTTGGTGAAGCTGTTAATCAGGGCATAATGTCTTCCCAGCTATCTTCTTTGCTGTTTCTTGTTGTGGGCATTTCAATGGCCATCACTCCATGGCTAGCTGCAGGAGGTCAGCTGATTGCTTCCCGTTTCGAGCAGAATGATGTTAGAAGTTTATTACCTGTAGAAAGTGAGACAGATGATCTGCAAGATCATATCATTATTTGTGGATTTGGACGAGTTGGCCAGATCATTGCTCAACTTCTTTCTGAGCGACTTATTCCATTTGTTGCGCTAGATGTGAGAAGTGATAGAGTGGCAGTTGGGCGAGCCCTGGATCTCCCTGTGTACTTTGGAGATGCTGGCAGTAGAGAGGTCCTACATAAGGTCGGGGCTGAAAGAGCCTGCGCTGCAGCTATAACTCTAGATACGCCTGGAGCAAATTATAGAACTGTTTGGGCTCTGAGCAAGTACTTCCCAAATGTGAAGACTTTTGTTCGCGCACATGACGTTGATCATGGCTTGAATTTAGAAAAGGCTGGAGCTACTGCGGTGGTCCCAGAGACCTTGGAACCAAGTCTTCAATTAGCAGCCGCTGTGCTTGCTCAGGCTAAACTACCCGCAGCAGAGATTTCAGCGACTATAAATGAATTCAGATGCCGACATCTAGCTGAGCTTACAGAGCTGTGCGAAGCAAGTGGAAGTTCTCTTGGTTATGGATTTACTAGAATAATGAGCAAATCCAAATCTCCCTCCCCAGATTCATTAGATTTAGATGATACCCAAGTCTCTGAAGGGACACTGGCAGTATGA 3594 0.4299 MNMDLGCSLPQSRILHGGVGTGCKQKLVGQVGCFDFRRRGFGSGFLGKSVSRSHFSVETKVSCVSAGWNDSKVVSSGEFKVLNTKRHTSCKNTKLLMGSRVIWLKCQGNDSLAYVNGNGRSVDYVEGSGEDAEVAHASNEGLDVPVEEEGKVGKDIGVEVLSVEELKELLQKALKELEVAQINSTMFEEKVKKISETAIFLHDEAARSLNDVNSSLDTIQKVANEEHLAKDAVQNATMALSLAEARLQVAVESLEAAKEVHEGSNEIDGDRDLTEKENTLFVAQEDIKACQENLANCEVELRRFQNKKEELQKEVSKLQEVAEKAQLDAMKAEEDVTNIMLLAEQAVAFELEATQRVNDAEIALQRADKSVSNSNADTVETIQVQDVVLVSEEENMVEIISDEVTVGRDKDLATVDDASLLTKLSPETQSEQTSQISDDTAQSDYTSDNENAVQTKKQEAQKDLTKDSSPFAPKSKKSSRFFPASFFSFPEEETESTPASVFQGLILSAKKQLPKLVLGLLLMGAGAAVYANRAEKNPRLLQQADVIATSAEEFSSNAKPLLRKLQKIPKKIKKIIASLPHQEVNEEEASLFDMLWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHATKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLATAAVVGLVAHYICGLPGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAAVAITAIIAGGRLLLRPIYKQVAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLFVSNFPVVTGTLALLICGKTILVSLMGRIFGISLISALRAGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMAITPWLAAGGQLIASRFEQNDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPAAEISATINEFRCRHLAELTELCEASGSSLGYGFTRIMSKSKSPSPDSLDLDDTQVSEGTLAV 1197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi956g00025 1197 MobiDBLite consensus disorder prediction 423 454 - -
Vivi956g00025 1197 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 996 1135 IPR036291 -
Vivi956g00025 1197 Coils Coil 287 335 - -
Vivi956g00025 1197 Pfam Sodium/hydrogen exchanger family 597 967 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vivi956g00025 1197 MobiDBLite consensus disorder prediction 423 478 - -
Vivi956g00025 1197 FunFam K(+) efflux antiporter 2 chloroplastic 587 973 - -
Vivi956g00025 1197 Coils Coil 160 183 - -
Vivi956g00025 1197 Gene3D - 587 975 IPR038770 -
Vivi956g00025 1197 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 198 1180 - -
Vivi956g00025 1197 ProSiteProfiles RCK N-terminal domain profile. 999 1121 IPR003148 GO:0006813
Vivi956g00025 1197 NCBIfam monovalent cation:proton antiporter-2 (CPA2) family protein 598 878 IPR004771 GO:0006812|GO:0008324|GO:0016020
Vivi956g00025 1197 Pfam TrkA-N domain 1000 1113 IPR003148 GO:0006813
Vivi956g00025 1197 FunFam K(+) efflux antiporter 2 chloroplastic 995 1159 - -
Vivi956g00025 1197 Gene3D - 995 1159 - -
Vivi956g00025 1197 MobiDBLite consensus disorder prediction 1175 1197 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi956g00025 104 1197 Inorganic Solute Cotransporters AT4G00630 70.837 0.0 1417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi956g00025 K03455 - gmx:100798822 1689.09