Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi952g00005 ATGACATTTTGTAGCATGTTTCTTTTCATTTTCATCCTTTCTATATTTGTTTCATCTAGTCATGGAACTGGAAGTGACAAAATTACTGCTTTGCCCACTCAACCCAAGGTGGGATTTAAACAATACGCGGGTTATGTAAATATTGATGTAAACAATGGAACAAAACTGTTCTATTACTTTGTAGAGGCAGAGAATCATCCTGCCTCTAAACCAGTAGTTCTTTGGCTTCATGGGGGGCCTGGTTGCTCTGCTATTGGAGAAGGTGCTTTCGGCCAACACGGCCCTTTCAAGACAACAATCAGGGGTCTTGTGAAAAACCCATTTAGCAGGAACCGAGAAGCGAATATGATCTACCTCGATTCTCCTACTGGTGTTGGCTTTTCCTATTCCACCAACACTTCTGATTATTTCTTTGTGGATGATGAAACTGCAGCAAGGGATCACCTTGCTTTTCTTGAGCATTGGTTCAGCAAATTTCCCAATTTCAGAACCAATGACTTCTTTATTGCTGGGGAGAGCTATGCAGGACACTATGCACCCCAACTTGCAGAGCTCATTTTCAAAATCAAAGCCAACATAAACTTGAAGGGAATAGCGATAGGAAATCCTCTTTTGGATTTCGATGTCGACTACAATTCCTCCGTCGAGTTTTTAAAGACGCATGGACAAATTTCAAGGTCAACATATCACGACCTAAAAGAAGTTTGTAGCTATCCGAACATTAGAAGAGAATATATATTTAATAAATTTACCAAGAGTTGCCAAGATGTAAATACAAAATTGTCTTTGAATGTTCATGGATTCACAAACAGGTTTAACGTGATTGCAGACAAGTGTCCAGCGGCTCCTGAAAATCAGAAATACCTCAAGCAAATGGGTGAGAAGGCTTTTGTATGCATAAGAGATGCAACATTTGCCTACATGAACATGAAAAAGACGCAAAAAGCTTTACATGCCGTGCTTGTAGGAAGGAAAATTTGGTCAGCTTGTAGTATGACTCTCCTGTATAATCCCCAGAGTCAGTTGATTCCAACCATCTCTATTCTAGGGACCCTTGTAAAGGCTGGTATAAGGGTTCTAGCATTTAGTGGTGATCAAGATTCTTGGATTCCATTTATTGGGACAGAGTTGTTGATTGAGGAAATGGCCAAGGATTTTGGGGTGGAAATCACAAGGCCCCATGAAGCTTGGTTTCAAGGAGGGCAGGTGGCGGGATGGACCCAAGAATATGGGAACTTTTTGACATTTGCAACAATAAAAGGTGCAGGTCATTCAGCCGGGAAATTTCAGCCAGAACGGACACTTGTGATGTGGAAGGCATTTTTGGAAGGAAAACCACTTCCAAAGAGACATCCATATCATTATTAA 1368 0.4094 MTFCSMFLFIFILSIFVSSSHGTGSDKITALPTQPKVGFKQYAGYVNIDVNNGTKLFYYFVEAENHPASKPVVLWLHGGPGCSAIGEGAFGQHGPFKTTIRGLVKNPFSRNREANMIYLDSPTGVGFSYSTNTSDYFFVDDETAARDHLAFLEHWFSKFPNFRTNDFFIAGESYAGHYAPQLAELIFKIKANINLKGIAIGNPLLDFDVDYNSSVEFLKTHGQISRSTYHDLKEVCSYPNIRREYIFNKFTKSCQDVNTKLSLNVHGFTNRFNVIADKCPAAPENQKYLKQMGEKAFVCIRDATFAYMNMKKTQKALHAVLVGRKIWSACSMTLLYNPQSQLIPTISILGTLVKAGIRVLAFSGDQDSWIPFIGTELLIEEMAKDFGVEITRPHEAWFQGGQVAGWTQEYGNFLTFATIKGAGHSAGKFQPERTLVMWKAFLEGKPLPKRHPYHY 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi952g00005 455 Pfam Serine carboxypeptidase 35 443 IPR001563 GO:0004185|GO:0006508
Vivi952g00005 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 129 IPR001563 GO:0004185|GO:0006508
Vivi952g00005 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 155 180 IPR001563 GO:0004185|GO:0006508
Vivi952g00005 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 414 427 IPR001563 GO:0004185|GO:0006508
Vivi952g00005 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 106 118 IPR001563 GO:0004185|GO:0006508
Vivi952g00005 455 Gene3D - 346 444 - -
Vivi952g00005 455 FunFam Carboxypeptidase 23 281 - -
Vivi952g00005 455 SUPERFAMILY alpha/beta-Hydrolases 32 448 IPR029058 -
Vivi952g00005 455 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 27 431 IPR001563 GO:0004185|GO:0006508
Vivi952g00005 455 Gene3D - 299 335 - -
Vivi952g00005 455 ProSitePatterns Serine carboxypeptidases, serine active site. 169 176 IPR018202 GO:0004185
Vivi952g00005 455 Gene3D alpha/beta hydrolase 23 280 IPR029058 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi952g00005 307 447 Calmodulin-binding Proteins AT2G22960 30.496 1.75e-15 72.8