Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi952g00004 ATGACATTTTGTAGCATGTTTCTTTTCATTTTCATCCTTTCTATATTTGTTTCATCTAGTCATGGAACTGGAAGTGACAAAATTACTGCTTTGCCCACTCAACCCAAGGTGGGATTTAAACAATACGCGGGTTATGTAAATATTGATGTAAACAATGGAACAAAACTGTTCTATTACTTTGTAGAGGCAGAGAATCATCCTGCCTCTAAACCAGTAGTTCTTTGGCTTCATGGGGGGCCTGGTTGCTCTGCTATTGGAGAAGGTGCTTTCGGCCAACACGGCCCTTTCAAGACAACAATCAGGGGTCTTGTGAAAAACCCATTTAGCAGGAACCGAGCAAGGGATCACCTTGCTTTTCTTGAGCATTGGTTCAGCAAATTTCCCAATTTCAGAACCAATGACTTCTTTATTGCTGGGGAGAGCTATGCAGGACACTATGCACCCCAACTTGCAGAGCTCATTTTCAAAATCAAAGCCAACATAAACTTGAAGGGAATAGCGATAGGAAATCCTCTTTTGGATTTCGATGTCGACTACAATTCCTCCGTCGAGTTTTTAAAGACGCATGGACAAATTTCAAGGTCAACATATCACGACCTAAAAGAAGTTTGTAGCTATCCGAACATTAGAAGAGAATATATATTTAATAAATTTACCAAGAGTTGCCAAGATGTAAATACAAAATTGTCTTTGAATGTTCATGGATTCACAAACAGGTTTAACGTGATTGCAGACAAGTGTCCAGCGGCTCCTGAAAATCAGAAATACCTCAAGCAAATGGGTGAGAAGGCTTTTGTATGCATAAGAGATGCAACATTTGCCTACATGAACATGAAAAAGACGCAAAAAGCTTTACATGCCGTGCTTGTAGGAAGGAAAATTTGGTCAGCTTGTAGTATGACTCTCCTGTATAATCCCCAGAGTCAGTTGATTCCAACCATCTCTATTCTAGGGACCCTTGTAAAGGCTGGTATAAGGGTTCTAGCATTTAGTGGTGATCAAGATTCTTGGATTCCATTTATTGGGACAGAGTTGTTGATTGAGGAAATGGCCAAGGATTTTGGGGTGGAAATCACAAGGCCCCATGAAGCTTGGTTTCAAGGAGGGCAGGTGGCGGGATGGACCCAAGAATATGGGAACTTTTTGACATTTGCAACAATAAAAGGTGCAGGTCATTCAGCCGGGAAATTTCAGCCAGAACGGACACTTGTGATGTGGAAGGCATTTTTGGAAGGAAAACCACTTCCAAAGAGACATCCATATCATTATTAA 1272 0.4096 MTFCSMFLFIFILSIFVSSSHGTGSDKITALPTQPKVGFKQYAGYVNIDVNNGTKLFYYFVEAENHPASKPVVLWLHGGPGCSAIGEGAFGQHGPFKTTIRGLVKNPFSRNRARDHLAFLEHWFSKFPNFRTNDFFIAGESYAGHYAPQLAELIFKIKANINLKGIAIGNPLLDFDVDYNSSVEFLKTHGQISRSTYHDLKEVCSYPNIRREYIFNKFTKSCQDVNTKLSLNVHGFTNRFNVIADKCPAAPENQKYLKQMGEKAFVCIRDATFAYMNMKKTQKALHAVLVGRKIWSACSMTLLYNPQSQLIPTISILGTLVKAGIRVLAFSGDQDSWIPFIGTELLIEEMAKDFGVEITRPHEAWFQGGQVAGWTQEYGNFLTFATIKGAGHSAGKFQPERTLVMWKAFLEGKPLPKRHPYHY 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi952g00004 423 ProSitePatterns Serine carboxypeptidases, serine active site. 137 144 IPR018202 GO:0004185
Vivi952g00004 423 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 148 IPR001563 GO:0004185|GO:0006508
Vivi952g00004 423 PRINTS Carboxypeptidase C serine protease (S10) family signature 382 395 IPR001563 GO:0004185|GO:0006508
Vivi952g00004 423 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 27 112 IPR001563 GO:0004185|GO:0006508
Vivi952g00004 423 Gene3D alpha/beta hydrolase 115 416 IPR029058 -
Vivi952g00004 423 Gene3D alpha/beta hydrolase 23 114 IPR029058 -
Vivi952g00004 423 Pfam Serine carboxypeptidase 112 411 IPR001563 GO:0004185|GO:0006508
Vivi952g00004 423 SUPERFAMILY alpha/beta-Hydrolases 32 416 IPR029058 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi952g00004 275 415 Calmodulin-binding Proteins AT2G22960 30.496 1.17e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi952g00004 K16297 - gmx:100805028 432.18