Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi951g00007 ATGGCTGCCGCTGACAACACCAACACCAACCCCAAGGATTATTACAAAGTGCTGGAGATTGATTATGATGCAACGGATGAAGATATTAGATTAAATTACCGAAGACTCGCCCTGAAATGGCATCCCGACAAACACATCGATGATACTTCTGTTACTGCACAATTTCAACAGATAAATGAAGCTTACACTGTATTGAGCGATCCTGTCAAGCGTCTTGACTATGATTTAACAGGGGCATGTGTGATTGACAAGTACAGCTTGCAGGAATATCTGGCCAGATTTAAAGGAATGATTCTCACCTGCAATGGACTTGGTATCAACCATGAAGACAGATGGTAA 339 0.4189 MAAADNTNTNPKDYYKVLEIDYDATDEDIRLNYRRLALKWHPDKHIDDTSVTAQFQQINEAYTVLSDPVKRLDYDLTGACVIDKYSLQEYLARFKGMILTCNGLGINHEDRW 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi951g00007 112 PRINTS DnaJ domain signature 50 70 IPR001623 -
Vivi951g00007 112 PRINTS DnaJ domain signature 33 48 IPR001623 -
Vivi951g00007 112 PRINTS DnaJ domain signature 15 33 IPR001623 -
Vivi951g00007 112 PRINTS DnaJ domain signature 70 89 IPR001623 -
Vivi951g00007 112 SMART dnaj_3 12 70 IPR001623 -
Vivi951g00007 112 Pfam DnaJ domain 13 75 IPR001623 -
Vivi951g00007 112 Gene3D DnaJ domain 2 91 IPR036869 -
Vivi951g00007 112 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 6 109 - -
Vivi951g00007 112 CDD DnaJ 13 67 IPR001623 -
Vivi951g00007 112 ProSiteProfiles dnaJ domain profile. 13 78 IPR001623 -
Vivi951g00007 112 SUPERFAMILY Chaperone J-domain 10 97 IPR036869 -
Vivi951g00007 112 FunFam Chaperone protein DNAj, putative 5 92 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi951g00007 4 75 C2H2 Transcription Factor Family AT1G74250 41.558 4.11e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi951g00007 - - mtr:120580229 205.297