Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi94g00023 ATGGCAGGTAGAATGGATTTCTTCAACAATTCACAAGATCCATTCAATGGTGAGTTAATGGAAGTACTTGAACCTTTTATGAAGAGTTCTTCCACTACTCCCTCTTCCTCTTTATCTACTTCTACACCCCCTTATCTAAATTCACACCTCCCTTCAACTTCATCCCAATTTTACTCTTCTACCCCTACCTATTTCCAACCCTCTTTTTCTTCACCTTCTTTTCCTCCTCCACAGCCCAATTTCTACACAGAAAACGGTTACAGTTCATCCATGATGAATTACCAATTTCCATCAGGAAATTCATCAACCAGCCAAAATTTCATTGGCTTTGAACAACAACCACAACCGAATTCTGCACTTGGGCTAAACAACTTAACTCCATCACAAATCAATCAGATCCAACACCAGATCCAGTTTCAGCCTCAACAAATGAATCAAAATTTAAGCTTTCTTGGGCCTAAGCCCGTTCCAATGAAACAGCCCGGTGCACCTCCAAAGCCGACGAAGCTTTACAGAGGTGTAAGGCAGAGACATTGGGGAAAATGGGTGGCTGAGATAAGATTGCCTAAAAACAGAACAAGGCTCTGGCTTGGAACTTTTGATACTGCTGAAGAAGCTGCTTTAGCTTATGATAGAGCTGCTTACAGACTAAGAGGTGATTTCGCTAGGCTTAATTTCCCAAACATGAAGGACCAGCAAGGTCTGTTTGGGGAGTTCAAGTCTCTGCATTCGTCTATCGATGCTAAACTCGATGCTATTTGTGAGAGTTTAGGCAATGATGAAGCGAAGAAATCTGGGAAAGTGGAGAAAAATGTGAAAGGTTCTAAGAAAGGTTTGAAGAAAGAGGTTCAACCGATTGTTGTTGCTGAAAATAATGATGGTGATAACAAAAAAGTTGTGGTTGAAAGCTCGAGTGAAGGGTCGGATGATTCTTCACCACTTTCTGATCTTACTTTTGGTGATTTTGGGGAGCCTCAGTGGGAGAATTGTTGTGAGCAGTTTAATCTGCAGAAGTTTCCTTCTTATGAGATTGATTGGGATTCTCTTTAG 1050 0.4124 MAGRMDFFNNSQDPFNGELMEVLEPFMKSSSTTPSSSLSTSTPPYLNSHLPSTSSQFYSSTPTYFQPSFSSPSFPPPQPNFYTENGYSSSMMNYQFPSGNSSTSQNFIGFEQQPQPNSALGLNNLTPSQINQIQHQIQFQPQQMNQNLSFLGPKPVPMKQPGAPPKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDRAAYRLRGDFARLNFPNMKDQQGLFGEFKSLHSSIDAKLDAICESLGNDEAKKSGKVEKNVKGSKKGLKKEVQPIVVAENNDGDNKKVVVESSSEGSDDSSPLSDLTFGDFGEPQWENCCEQFNLQKFPSYEIDWDSL 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi94g00023 349 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 10 349 - -
Vivi94g00023 349 SMART rav1_2 170 233 IPR001471 GO:0003700|GO:0006355
Vivi94g00023 349 SUPERFAMILY DNA-binding domain 170 227 IPR016177 GO:0003677
Vivi94g00023 349 MobiDBLite consensus disorder prediction 293 321 - -
Vivi94g00023 349 CDD AP2 169 228 IPR001471 GO:0003700|GO:0006355
Vivi94g00023 349 Pfam AP2 domain 171 219 IPR001471 GO:0003700|GO:0006355
Vivi94g00023 349 ProSiteProfiles AP2/ERF domain profile. 170 227 IPR001471 GO:0003700|GO:0006355
Vivi94g00023 349 FunFam Ethylene-responsive transcription factor 2 169 228 - -
Vivi94g00023 349 PRINTS Ethylene responsive element binding protein signature 171 182 IPR001471 GO:0003700|GO:0006355
Vivi94g00023 349 PRINTS Ethylene responsive element binding protein signature 193 209 IPR001471 GO:0003700|GO:0006355
Vivi94g00023 349 Gene3D AP2/ERF domain 170 229 IPR036955 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi94g00023 1 349 AP2-EREBP Transcription Factor Family AT1G78080 45.767 5.37e-81 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Vivi94g00023 AP2 7.9e-15 CL0081