Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi939g00019 ATGGAATCGGAAGCATCTGTTTCATTTTCAGCTGCATCTCTTGTAGAAGACGTACTTCAACAACACGGTCATCGCCTCAAGGATCTTGATTTAGAATATAGAAAAGCAGAAGAAGCTGCATGTAGAAGATATGAAGCGGCAGGGTGGTTGAGAAAAATGATCGGGGTTGTTGCGGCTAAGGATTTACCGGCCGAGCCTTCTGAAGAAGAGTTTAGGCTTGTTTTGAGGAGTGGAATTATCTTGTGTAATGCTATTAATAAGGTTCAATCTGGAGCTGTTCCTAAGGTTGTGGAGAGTCCCGTTGATTCTGCACTGATCCCGAACGGGGCACCATTATCGGCTTATCAATATTTTGAAAATGTGAGGAATTTTATGGTGGCTGTACAAGAAATTGGACTTCCTACCTTCGAGCCATCTGATCTGGAACAAGGAGGAAAATCATCCAGGATTGTGAATTGCGTTTTGGCTCTTAAGTTGTACTGTGAATGGAAACAGAATGGTGCAAATGGTGCGTGGAAATTTGGTGGAAATCCCAAACCTACTATTTCTGCTAAATCTTTTGTGAGAAAAAATTCGGATCCATTTACTAATTCCTTGTCAAGGACCTCTTCAATCAATGAAAAAACTCTGGCTACTCTTAATTCTGATATTGAGTCTAGTAAAATGTCTGGTTCCCTTTCTTTGAGTAAGCTTGTTCGTTCTATTCTATCGGATAAAAGGCCAGAAGAAATTCCAATGTTGGTTGAATCTGTTTTGAATAAGGTAGTTGAGGAGTTTGAACACCGTATTGCAAGCCAAGGTGAACAGACAAAAAATACTTTAAGAGATCATGTTTCTCAAACAAACGGATCTGCCTCAAAGTTTGTCTTGGCAGATAAAAAGGTGGAGAACAAGATTCATATGGTAGCTAAGAAAGAGGATTACATTCATAAAAATCATGTGGCTGCTGAGGAATTGCAAAGCCAACACCTTAAACAGAAAATGCTTTTTGACCAACAGCAAAGAGACATTCAAGAGCTAAAGCTTACTCTTCACACCACAAAAGCTGGTATGCAGTTCATGCAAATGAAGTTTCGTGACGAATTTTCCAATCTTGGAATGCATATTCATGACTTAGCTCAGGCTGCCTCTGGATATCATAGAGTTCTGGAAGAAAATCGCAAACTATACAATGAAGTCCAAGATCTAAAGGGAAGTATTAGGGTATATTGTCGAATAAGACCCTTCTTTCCTGGACAACCAAACCAATTGAGCGCAGTAGAAAATATAGAAGATGGAACAATCACAGTTGGTATTCCTTCGAGGAATGGGAAGGGACAAAGATCCTTCAACTTTAACAAAGTCTTTGGACCATCTGCGACCCAAGCGGAGGTATTCCTGGATATGCAACCACTTATCAGATCTGTTCTTGATGGTTATAATGTCTGCATTTTTGCATATGGCCAAACAGGATCAGGAAAAACTTACACAATGACCGGACCAAAAGAGATCACTGAGAAGAGCCAAGGTGTAAATTACAGGGCTCTAAGCGATTTGTTTTTTATAGCCGAGCAAAGAAAGGACACTTTCCAGTATGATGTTTGTGTTCAAATGATTGAAATTTATAATGAGCAAGTCCGGGATCTGTTGGTCACTGATGGAACAAACAAAAAATTAGAAATTCATAGCAGCTCTCAGAAAGGGCTCAGTGTGCCAGATGCAAGCCTTGTCCCAGTGTCATCAACTATTGATGTTATTGAACTAATGAACCTTGGGCATAGGAACCGTGCAGTTGGAGCAACAGCCCTTAACGACCGCAGTAGTCGATCTCATAGTTGCTTGACTGTTCATGTTCAAGGAAGAGATTTGACAACTGGAGCAACCCTCCGCGGATGCATGCATTTGGTTGACTTAGCAGGAAGTGAGAGGGTAGATAAATCAGAGGCAACCGGAGATAGACTAAAAGAGGCACAACATATTAACAAATCTTTATCAGCTTTGGGCGATGTCATAGCTTCCCTTGCTCGTAAAAACTCACACATACCTTATAGGAATAGTAAACTCACACAATTGCTTCAAGATTCACTTGGAGGACAGGCCAAGACCCTGATGTTTGTTCACATCAGTCCAGAAAGTGATGCAATTGGAGAAACAATTAGTACTTTAAAATTTGCAGAAAGAGTTGCGACAGTTGAACTTGGTGCTGCTCAAGTAAACAAAGATGGTGCAAATGTTAAAGAGCTCAAAGAACAGATTGCCAGCCTTAAAGCAGCACTGGCAAGAAAAGAAGGGGAATCAGAACATTCTTTTTCTGGAAGCTCTGAAAAATATAGGACAAAGGCTGAGCTATCCCCTTATCATTTAAACCAGCGGGTTGTTGACTCCGGCAACCGGCTTGGATACAGACGACCAATGGTTGAAGTTGGCAACATAGAGCTTCAGAGTAAAACCATACTGAGACAGAAAACTAAAAGCGTTGATTTTGATGAGATATCAGTAAATTCACCACCCTGGCCCCCAGTAAATAGTATTGGACCAAACGACGGTGAGGATGAGAAAGAAACAGGTTCCGGAGAATGGGTTGATAAGGTAATGGTAAACAAGCTAGAAGCAAACAAAACTGAGAACCTCTTGGGTTGTTGGCAAGAAAGCAATGGAAACTTATCCGAGGCCTTTTATCAAACGTATCTCCAAGATTCTTCCAAAATGTATTCAGAACAGTCCTATAATATGTTCATGGGAGGTAACCAGTTTAATAGCAGTATGGCTTCAGATGATAACATGGATGAGATTGATGCCGCAACCAGTGATTCCTCGGAACCTGACTTGCTTTGGCAATTTAATCATTCTAAACTTACCGGTTTGACCAATGGAATTGGATCAAAAACTATTATGAAATCTGTCTCAAAACCAACAAAAAGCCCACAATTAAGCAAGAGTTCTGTTCATTCTTCTATTGGTCCTTCCCCTTCATTGAAACAATCCAAAGTTGTCTCACATAAGACAGGAAGGAGTCCAGCTCCTGTTGACATGAAACGTAAAATTGGGGGTAGAAAGTAA 3039 0.4061 MESEASVSFSAASLVEDVLQQHGHRLKDLDLEYRKAEEAACRRYEAAGWLRKMIGVVAAKDLPAEPSEEEFRLVLRSGIILCNAINKVQSGAVPKVVESPVDSALIPNGAPLSAYQYFENVRNFMVAVQEIGLPTFEPSDLEQGGKSSRIVNCVLALKLYCEWKQNGANGAWKFGGNPKPTISAKSFVRKNSDPFTNSLSRTSSINEKTLATLNSDIESSKMSGSLSLSKLVRSILSDKRPEEIPMLVESVLNKVVEEFEHRIASQGEQTKNTLRDHVSQTNGSASKFVLADKKVENKIHMVAKKEDYIHKNHVAAEELQSQHLKQKMLFDQQQRDIQELKLTLHTTKAGMQFMQMKFRDEFSNLGMHIHDLAQAASGYHRVLEENRKLYNEVQDLKGSIRVYCRIRPFFPGQPNQLSAVENIEDGTITVGIPSRNGKGQRSFNFNKVFGPSATQAEVFLDMQPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPKEITEKSQGVNYRALSDLFFIAEQRKDTFQYDVCVQMIEIYNEQVRDLLVTDGTNKKLEIHSSSQKGLSVPDASLVPVSSTIDVIELMNLGHRNRAVGATALNDRSSRSHSCLTVHVQGRDLTTGATLRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLARKNSHIPYRNSKLTQLLQDSLGGQAKTLMFVHISPESDAIGETISTLKFAERVATVELGAAQVNKDGANVKELKEQIASLKAALARKEGESEHSFSGSSEKYRTKAELSPYHLNQRVVDSGNRLGYRRPMVEVGNIELQSKTILRQKTKSVDFDEISVNSPPWPPVNSIGPNDGEDEKETGSGEWVDKVMVNKLEANKTENLLGCWQESNGNLSEAFYQTYLQDSSKMYSEQSYNMFMGGNQFNSSMASDDNMDEIDAATSDSSEPDLLWQFNHSKLTGLTNGIGSKTIMKSVSKPTKSPQLSKSSVHSSIGPSPSLKQSKVVSHKTGRSPAPVDMKRKIGGRK 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi939g00019 1012 PANTHER KINESIN-LIKE PROTEIN KLP-3 47 958 IPR027640 GO:0003777|GO:0007018
Vivi939g00019 1012 SMART ch_5 42 160 IPR001715 GO:0005515
Vivi939g00019 1012 Pfam Calponin homology (CH) domain 41 162 IPR001715 GO:0005515
Vivi939g00019 1012 SMART kinesin_4 397 732 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi939g00019 1012 MobiDBLite consensus disorder prediction 961 994 - -
Vivi939g00019 1012 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
Vivi939g00019 1012 ProSiteProfiles Kinesin motor domain profile. 399 724 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi939g00019 1012 Coils Coil 731 758 - -
Vivi939g00019 1012 MobiDBLite consensus disorder prediction 961 1012 - -
Vivi939g00019 1012 FunFam Kinesin-like protein KIN-14I isoform A 394 766 - -
Vivi939g00019 1012 Gene3D Kinesin motor domain 394 765 IPR036961 -
Vivi939g00019 1012 MobiDBLite consensus disorder prediction 823 850 - -
Vivi939g00019 1012 CDD CH_AtKIN14-like 42 159 - -
Vivi939g00019 1012 Pfam Kinesin motor domain 406 723 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi939g00019 1012 CDD KISc_C_terminal 397 726 - -
Vivi939g00019 1012 FunFam Kinesin-like protein KIN-14I isoform A 27 179 - -
Vivi939g00019 1012 Coils Coil 19 39 - -
Vivi939g00019 1012 SUPERFAMILY Calponin-homology domain, CH-domain 37 172 IPR036872 -
Vivi939g00019 1012 Gene3D - 27 177 IPR036872 -
Vivi939g00019 1012 PRINTS Kinesin heavy chain signature 674 695 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi939g00019 1012 PRINTS Kinesin heavy chain signature 472 493 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi939g00019 1012 PRINTS Kinesin heavy chain signature 594 611 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi939g00019 1012 PRINTS Kinesin heavy chain signature 625 643 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi939g00019 1012 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 399 756 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi939g00019 387 724 Calmodulin-binding Proteins AT5G65930 43.363 2.20e-77 275