Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi935g00004 ATGGTTAAGCAAGACAAGGAAAGCATTCAGAGAAACATTAGAGGGCACTTTACCGACAGTGAAAGGCATGTGAAGGACTTGATAGACATGGAGGGATTGGAAGAGAATGATAATGAAGGAATAGAGGTTCCTTACTTTGATTTTGAGACCATAGTGACGGCAACTAATAATTTTTCAGATGCAAATAAGCTTGGTAAAGGTGGTTATGGACCAGTTTATAAGGGTACACTACAAGGTGGTCAAGAAATTGCAGTGAAGAGGCTTTCAAGTGTGTCATCACAAGGTTTACAGGAATTTAAGAATGAAGTTGTTTTGATTGCCAAACTCCAACATCGAAATCTTGTTAAATTACGCGGCTATTGCATAAAGGGAGAAGAAAAAATTCTATTCTATGAATATATGCCTAATAAGAGTTTGGACTTATTGATCTTCGATCCTGCAAAAAGCATAATTTTGGATTGGCCAATGCGGTTTGATATAATTCTCGGAATTGCTCGTGGACTACTCTATCTTCATCAAGACTCTAGACTTAGAGTTATTCATCGAGATTTAAAAACTAGCAACATTCTTCTAGACAAGGAGATGCAACCAAAAATATCCGATTTTGGATTGGCAAGAATATTTGGAGGCAAGGAAACAGAAGCAAATACTGAGAGAGTTGTCGGGACATATGGATACATGTCTCCCGAATATGCATTAGAAGGACAATTCTCTACAAAATCAGATGTTTTCAGCTTTGGTGTTGTCTTGCTTGAGATCATTAGTGGAAAAAAGAACATGGGATTTCATCGGACTAGAGAAATTTCAAGCCTTTTGGGTTATGCCTGGACACTATGGAGAGAAGAAAAACTCCAAGATTTAATGGATTCATCTCTATGTGATACTTATGATGCTTACCAAATCATTAGGTGTTCACAAATAGGACTTTTATGCGTACAAGATGAGCCAGATGATCGTCCACACATGTCAAATGTTGTGACCATGCTAGACAATGAAACTACATTCCTATCAGTTCCTAAACAACCAACCTTTTTTACACGTAAAAACCTATCTAACACAGCTTCTTCAAGTGTGCAACTTGAAAGTAGTATTCAAGAAGGCCGATAG 1107 0.3749 MVKQDKESIQRNIRGHFTDSERHVKDLIDMEGLEENDNEGIEVPYFDFETIVTATNNFSDANKLGKGGYGPVYKGTLQGGQEIAVKRLSSVSSQGLQEFKNEVVLIAKLQHRNLVKLRGYCIKGEEKILFYEYMPNKSLDLLIFDPAKSIILDWPMRFDIILGIARGLLYLHQDSRLRVIHRDLKTSNILLDKEMQPKISDFGLARIFGGKETEANTERVVGTYGYMSPEYALEGQFSTKSDVFSFGVVLLEIISGKKNMGFHRTREISSLLGYAWTLWREEKLQDLMDSSLCDTYDAYQIIRCSQIGLLCVQDEPDDRPHMSNVVTMLDNETTFLSVPKQPTFFTRKNLSNTASSSVQLESSIQEGR 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi935g00004 368 Gene3D Transferase(Phosphotransferase) domain 1 134 340 - -
Vivi935g00004 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Vivi935g00004 368 Pfam Protein tyrosine and serine/threonine kinase 62 329 IPR001245 GO:0004672|GO:0006468
Vivi935g00004 368 Gene3D Phosphorylase Kinase; domain 1 22 133 - -
Vivi935g00004 368 ProSiteProfiles Protein kinase domain profile. 58 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi935g00004 368 SMART serkin_6 58 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi935g00004 368 CDD STKc_IRAK 64 331 - -
Vivi935g00004 368 SUPERFAMILY Protein kinase-like (PK-like) 40 351 IPR011009 -
Vivi935g00004 368 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 23 133 - -
Vivi935g00004 368 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 34 355 - -
Vivi935g00004 368 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 134 337 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi935g00004 46 345 Receptor kinase-like Gene Family AT4G23140 59.150 1.43e-130 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi935g00004 PK_Tyr_Ser-Thr 5.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi935g00004 - - tpra:123882048 662.529